Gene : Cucsa.174600 C. sativus v1.0
Defline:  (1 of 1) PTHR12565:SF85 - TRANSCRIPTION FACTOR BIM3 Genomic Order:  23
Name:  ? Cucsa.174600 Secondary Identifier:  ? PAC:16966687
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.174600 0.5kb upstream 0.5kb upstream 4280 true scaffold01221: 268545-272824 Cucumis sativus
Cucsa.174600 0.5kb upstream 0.5kb upstream 500 false scaffold01221: 272325-272824 Cucumis sativus
Cucsa.174600 0.5kb downstream 0.5kb downstream 4280 true scaffold01221: 268045-272324 Cucumis sativus
Cucsa.174600 0.5kb downstream 0.5kb downstream 500 false scaffold01221: 268045-268544 Cucumis sativus
Cucsa.174600 1.0kb upstream 1.0kb upstream 4780 true scaffold01221: 268545-273324 Cucumis sativus
Cucsa.174600 1.0kb upstream 1.0kb upstream 1000 false scaffold01221: 272325-273324 Cucumis sativus
Cucsa.174600 1.0kb downstream 1.0kb downstream 4780 true scaffold01221: 267545-272324 Cucumis sativus
Cucsa.174600 1.0kb downstream 1.0kb downstream 1000 false scaffold01221: 267545-268544 Cucumis sativus
Cucsa.174600 2.0kb upstream 2.0kb upstream 5780 true scaffold01221: 268545-274324 Cucumis sativus
Cucsa.174600 2.0kb upstream 2.0kb upstream 2000 false scaffold01221: 272325-274324 Cucumis sativus
Cucsa.174600 2.0kb downstream 2.0kb downstream 5780 true scaffold01221: 266545-272324 Cucumis sativus
Cucsa.174600 2.0kb downstream 2.0kb downstream 2000 false scaffold01221: 266545-268544 Cucumis sativus
Cucsa.174600 5.0kb upstream 5.0kb upstream 8780 true scaffold01221: 268545-277324 Cucumis sativus
Cucsa.174600 5.0kb upstream 5.0kb upstream 5000 false scaffold01221: 272325-277324 Cucumis sativus
Cucsa.174600 5.0kb downstream 5.0kb downstream 8780 true scaffold01221: 263545-272324 Cucumis sativus
Cucsa.174600 5.0kb downstream 5.0kb downstream 5000 false scaffold01221: 263545-268544 Cucumis sativus
Cucsa.174600 10.0kb upstream 10.0kb upstream 13780 true scaffold01221: 268545-282324 Cucumis sativus
Cucsa.174600 10.0kb upstream 10.0kb upstream 10000 false scaffold01221: 272325-282324 Cucumis sativus
Cucsa.174600 10.0kb downstream 10.0kb downstream 13780 true scaffold01221: 258545-272324 Cucumis sativus
Cucsa.174600 10.0kb downstream 10.0kb downstream 10000 false scaffold01221: 258545-268544 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300056 5265 Fabidae View MSA
124070966 5270 Rosid View MSA
123742904 5271 Pentapetalae View MSA
122797269 5272 Eudicot View MSA
122046881 5273 Angiosperm View MSA
121348142 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain