Gene : Cucsa.172940 C. sativus v1.0
Defline:  (1 of 1) PTHR23023:SF121 - INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA11-RELATED Genomic Order:  7
Name:  ? Cucsa.172940 Secondary Identifier:  ? PAC:16966603
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWYDQC-4 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.172940 0.5kb upstream 0.5kb upstream 2003 true scaffold01201: 103534-105536 Cucumis sativus
Cucsa.172940 0.5kb upstream 0.5kb upstream 500 false scaffold01201: 103534-104033 Cucumis sativus
Cucsa.172940 0.5kb downstream 0.5kb downstream 2003 true scaffold01201: 104034-106036 Cucumis sativus
Cucsa.172940 0.5kb downstream 0.5kb downstream 500 false scaffold01201: 105537-106036 Cucumis sativus
Cucsa.172940 1.0kb upstream 1.0kb upstream 2503 true scaffold01201: 103034-105536 Cucumis sativus
Cucsa.172940 1.0kb upstream 1.0kb upstream 1000 false scaffold01201: 103034-104033 Cucumis sativus
Cucsa.172940 1.0kb downstream 1.0kb downstream 2503 true scaffold01201: 104034-106536 Cucumis sativus
Cucsa.172940 1.0kb downstream 1.0kb downstream 1000 false scaffold01201: 105537-106536 Cucumis sativus
Cucsa.172940 2.0kb upstream 2.0kb upstream 3503 true scaffold01201: 102034-105536 Cucumis sativus
Cucsa.172940 2.0kb upstream 2.0kb upstream 2000 false scaffold01201: 102034-104033 Cucumis sativus
Cucsa.172940 2.0kb downstream 2.0kb downstream 3503 true scaffold01201: 104034-107536 Cucumis sativus
Cucsa.172940 2.0kb downstream 2.0kb downstream 2000 false scaffold01201: 105537-107536 Cucumis sativus
Cucsa.172940 5.0kb upstream 5.0kb upstream 6503 true scaffold01201: 99034-105536 Cucumis sativus
Cucsa.172940 5.0kb upstream 5.0kb upstream 5000 false scaffold01201: 99034-104033 Cucumis sativus
Cucsa.172940 5.0kb downstream 5.0kb downstream 6503 true scaffold01201: 104034-110536 Cucumis sativus
Cucsa.172940 5.0kb downstream 5.0kb downstream 5000 false scaffold01201: 105537-110536 Cucumis sativus
Cucsa.172940 10.0kb upstream 10.0kb upstream 11503 true scaffold01201: 94034-105536 Cucumis sativus
Cucsa.172940 10.0kb upstream 10.0kb upstream 10000 false scaffold01201: 94034-104033 Cucumis sativus
Cucsa.172940 10.0kb downstream 10.0kb downstream 11503 true scaffold01201: 104034-115536 Cucumis sativus
Cucsa.172940 10.0kb downstream 10.0kb downstream 10000 false scaffold01201: 105537-115536 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301765 5265 Fabidae View MSA
124069751 5270 Rosid View MSA
123749752 5271 Pentapetalae View MSA
122794899 5272 Eudicot View MSA
122047342 5273 Angiosperm View MSA
121310731 5274 Embryophyte View MSA
123348144 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain