Gene : Cucsa.170770 C. sativus v1.0
Defline:  (1 of 1) PTHR12601:SF9 - TETRATRICOPEPTIDE REPEAT DOMAIN PROTEIN Genomic Order:  14
Name:  ? Cucsa.170770 Secondary Identifier:  ? PAC:16966507
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.170770 0.5kb upstream 0.5kb upstream 10479 true scaffold01179: 95745-106223 Cucumis sativus
Cucsa.170770 0.5kb upstream 0.5kb upstream 500 false scaffold01179: 95745-96244 Cucumis sativus
Cucsa.170770 0.5kb downstream 0.5kb downstream 10479 true scaffold01179: 96245-106723 Cucumis sativus
Cucsa.170770 0.5kb downstream 0.5kb downstream 500 false scaffold01179: 106224-106723 Cucumis sativus
Cucsa.170770 1.0kb upstream 1.0kb upstream 10979 true scaffold01179: 95245-106223 Cucumis sativus
Cucsa.170770 1.0kb upstream 1.0kb upstream 1000 false scaffold01179: 95245-96244 Cucumis sativus
Cucsa.170770 1.0kb downstream 1.0kb downstream 10979 true scaffold01179: 96245-107223 Cucumis sativus
Cucsa.170770 1.0kb downstream 1.0kb downstream 1000 false scaffold01179: 106224-107223 Cucumis sativus
Cucsa.170770 2.0kb upstream 2.0kb upstream 11979 true scaffold01179: 94245-106223 Cucumis sativus
Cucsa.170770 2.0kb upstream 2.0kb upstream 2000 false scaffold01179: 94245-96244 Cucumis sativus
Cucsa.170770 2.0kb downstream 2.0kb downstream 11979 true scaffold01179: 96245-108223 Cucumis sativus
Cucsa.170770 2.0kb downstream 2.0kb downstream 2000 false scaffold01179: 106224-108223 Cucumis sativus
Cucsa.170770 5.0kb upstream 5.0kb upstream 14979 true scaffold01179: 91245-106223 Cucumis sativus
Cucsa.170770 5.0kb upstream 5.0kb upstream 5000 false scaffold01179: 91245-96244 Cucumis sativus
Cucsa.170770 5.0kb downstream 5.0kb downstream 14979 true scaffold01179: 96245-111223 Cucumis sativus
Cucsa.170770 5.0kb downstream 5.0kb downstream 5000 false scaffold01179: 106224-111223 Cucumis sativus
Cucsa.170770 10.0kb upstream 10.0kb upstream 19979 true scaffold01179: 86245-106223 Cucumis sativus
Cucsa.170770 10.0kb upstream 10.0kb upstream 10000 false scaffold01179: 86245-96244 Cucumis sativus
Cucsa.170770 10.0kb downstream 10.0kb downstream 19979 true scaffold01179: 96245-116223 Cucumis sativus
Cucsa.170770 10.0kb downstream 10.0kb downstream 10000 false scaffold01179: 106224-116223 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305487 5265 Fabidae View MSA
124073724 5270 Rosid View MSA
123753708 5271 Pentapetalae View MSA
122789807 5272 Eudicot View MSA
122044017 5273 Angiosperm View MSA
121347327 5274 Embryophyte View MSA
123427490 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain