Gene : Cucsa.151230 C. sativus v1.0
Defline:  (1 of 2) 2.1.1.257 - tRNA (pseudouridine(54)-N(1))-methyltransferase / M(1)-Psi methyltransferase Genomic Order:  7
Name:  ? Cucsa.151230 Secondary Identifier:  ? PAC:16964435
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.151230 0.5kb upstream 0.5kb upstream 1789 true scaffold01116: 93388-95176 Cucumis sativus
Cucsa.151230 0.5kb upstream 0.5kb upstream 500 false scaffold01116: 94677-95176 Cucumis sativus
Cucsa.151230 0.5kb downstream 0.5kb downstream 1789 true scaffold01116: 92888-94676 Cucumis sativus
Cucsa.151230 0.5kb downstream 0.5kb downstream 500 false scaffold01116: 92888-93387 Cucumis sativus
Cucsa.151230 1.0kb upstream 1.0kb upstream 2289 true scaffold01116: 93388-95676 Cucumis sativus
Cucsa.151230 1.0kb upstream 1.0kb upstream 1000 false scaffold01116: 94677-95676 Cucumis sativus
Cucsa.151230 1.0kb downstream 1.0kb downstream 2289 true scaffold01116: 92388-94676 Cucumis sativus
Cucsa.151230 1.0kb downstream 1.0kb downstream 1000 false scaffold01116: 92388-93387 Cucumis sativus
Cucsa.151230 2.0kb upstream 2.0kb upstream 3289 true scaffold01116: 93388-96676 Cucumis sativus
Cucsa.151230 2.0kb upstream 2.0kb upstream 2000 false scaffold01116: 94677-96676 Cucumis sativus
Cucsa.151230 2.0kb downstream 2.0kb downstream 3289 true scaffold01116: 91388-94676 Cucumis sativus
Cucsa.151230 2.0kb downstream 2.0kb downstream 2000 false scaffold01116: 91388-93387 Cucumis sativus
Cucsa.151230 5.0kb upstream 5.0kb upstream 6289 true scaffold01116: 93388-99676 Cucumis sativus
Cucsa.151230 5.0kb upstream 5.0kb upstream 5000 false scaffold01116: 94677-99676 Cucumis sativus
Cucsa.151230 5.0kb downstream 5.0kb downstream 6289 true scaffold01116: 88388-94676 Cucumis sativus
Cucsa.151230 5.0kb downstream 5.0kb downstream 5000 false scaffold01116: 88388-93387 Cucumis sativus
Cucsa.151230 10.0kb upstream 10.0kb upstream 11289 true scaffold01116: 93388-104676 Cucumis sativus
Cucsa.151230 10.0kb upstream 10.0kb upstream 10000 false scaffold01116: 94677-104676 Cucumis sativus
Cucsa.151230 10.0kb downstream 10.0kb downstream 11289 true scaffold01116: 83388-94676 Cucumis sativus
Cucsa.151230 10.0kb downstream 10.0kb downstream 10000 false scaffold01116: 83388-93387 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027374 5273 Angiosperm View MSA
122237118 5265 Fabidae View MSA
124074207 5270 Rosid View MSA
123742956 5271 Pentapetalae View MSA
122796671 5272 Eudicot View MSA
121349170 5274 Embryophyte View MSA
123381197 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain