Gene : Cucsa.357430 C. sativus v1.0
Defline:  (1 of 12) 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase Genomic Order:  24
Name:  ? Cucsa.357430 Secondary Identifier:  ? PAC:16980410
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-1081 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.357430 0.5kb upstream 0.5kb upstream 3191 true scaffold03578: 458506-461696 Cucumis sativus
Cucsa.357430 0.5kb upstream 0.5kb upstream 500 false scaffold03578: 461197-461696 Cucumis sativus
Cucsa.357430 0.5kb downstream 0.5kb downstream 3191 true scaffold03578: 458006-461196 Cucumis sativus
Cucsa.357430 0.5kb downstream 0.5kb downstream 500 false scaffold03578: 458006-458505 Cucumis sativus
Cucsa.357430 1.0kb upstream 1.0kb upstream 3691 true scaffold03578: 458506-462196 Cucumis sativus
Cucsa.357430 1.0kb upstream 1.0kb upstream 1000 false scaffold03578: 461197-462196 Cucumis sativus
Cucsa.357430 1.0kb downstream 1.0kb downstream 3691 true scaffold03578: 457506-461196 Cucumis sativus
Cucsa.357430 1.0kb downstream 1.0kb downstream 1000 false scaffold03578: 457506-458505 Cucumis sativus
Cucsa.357430 2.0kb upstream 2.0kb upstream 4691 true scaffold03578: 458506-463196 Cucumis sativus
Cucsa.357430 2.0kb upstream 2.0kb upstream 2000 false scaffold03578: 461197-463196 Cucumis sativus
Cucsa.357430 2.0kb downstream 2.0kb downstream 4691 true scaffold03578: 456506-461196 Cucumis sativus
Cucsa.357430 2.0kb downstream 2.0kb downstream 2000 false scaffold03578: 456506-458505 Cucumis sativus
Cucsa.357430 5.0kb upstream 5.0kb upstream 7691 true scaffold03578: 458506-466196 Cucumis sativus
Cucsa.357430 5.0kb upstream 5.0kb upstream 5000 false scaffold03578: 461197-466196 Cucumis sativus
Cucsa.357430 5.0kb downstream 5.0kb downstream 7691 true scaffold03578: 453506-461196 Cucumis sativus
Cucsa.357430 5.0kb downstream 5.0kb downstream 5000 false scaffold03578: 453506-458505 Cucumis sativus
Cucsa.357430 10.0kb upstream 10.0kb upstream 12691 true scaffold03578: 458506-471196 Cucumis sativus
Cucsa.357430 10.0kb upstream 10.0kb upstream 10000 false scaffold03578: 461197-471196 Cucumis sativus
Cucsa.357430 10.0kb downstream 10.0kb downstream 12691 true scaffold03578: 448506-461196 Cucumis sativus
Cucsa.357430 10.0kb downstream 10.0kb downstream 10000 false scaffold03578: 448506-458505 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309648 5265 Fabidae View MSA
124071236 5270 Rosid View MSA
123746324 5271 Pentapetalae View MSA
122797497 5272 Eudicot View MSA
122051291 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain