Protein Family : Pectin lyase-like superfamily protein 124071236

Method ID:  5270 Method Name:  Rosid
Sequence Alignment:  View MSA Member Count:  97

97 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29726.t000202 (1 of 1) 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase R. communis v0.1 2137   29726: 1149137-1151273
Cucsa.388450 (1 of 57) 3.2.1.15 - Polygalacturonase / Pectinase C. sativus v1.0 2325   scaffold03967: 855377-857701
Cucsa.099870 (1 of 1) PTHR31375:SF11 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN C. sativus v1.0 5271   scaffold00926: 540125-545395
Cucsa.143900 (1 of 12) 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase C. sativus v1.0 2678   scaffold01080: 280320-282997
Cucsa.357430 (1 of 12) 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase C. sativus v1.0 2691   scaffold03578: 458506-461196
Cucsa.205410 (1 of 12) 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase C. sativus v1.0 2207   scaffold01416: 518480-520686
Cucsa.205370 (1 of 12) 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase C. sativus v1.0 2644   scaffold01416: 463305-465948
Cucsa.205400 (1 of 12) 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase C. sativus v1.0 2396   scaffold01416: 511755-514150
Cucsa.252840 (1 of 12) 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase C. sativus v1.0 1628   scaffold02229: 1688732-1690359
orange1.1g043757m.g (1 of 5) 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase C. sinensis v1.1 1830   scaffold00001: 4870360-4872189
AT4G18180 (1 of 1) PTHR31375//PTHR31375:SF11 - FAMILY NOT NAMED // GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN A. thaliana TAIR10 1692   Chr4: 10065626-10067317
AT1G02790 (1 of 1) PTHR31375:SF17 - EXOPOLYGALACTURONASE CLONE GBGE184 A. thaliana TAIR10 PGA4 1934   Chr1: 610391-612324
Thhalv10027030m.g (1 of 1) PTHR31375:SF11 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN E. salsugineum v1.0 2055   scaffold_1: 9587201-9589255
Thhalv10007721m.g (1 of 1) PTHR31375:SF17 - EXOPOLYGALACTURONASE CLONE GBGE184 E. salsugineum v1.0 1943   scaffold_5: 14999355-15001297
Thhalv10005587m.g (1 of 52) 3.2.1.15 - Polygalacturonase / Pectinase E. salsugineum v1.0 1822   scaffold_6: 4706467-4708288
Ciclev10023712m.g (1 of 4) 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase C. clementina v1.0 1819   scaffold_3: 46025851-46027669
Lus10016824.g (1 of 79) 3.2.1.15 - Polygalacturonase / Pectinase L. usitatissimum v1.0 1666   scaffold153: 41636-43301
Lus10012489.g (1 of 3) 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase L. usitatissimum v1.0 1971   scaffold660: 292807-294777
Lus10003782.g (1 of 3) 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase L. usitatissimum v1.0 1804   scaffold89: 19344-21147
Gorai.005G061900 (1 of 55) 3.2.1.15 - Polygalacturonase / Pectinase G. raimondii v2.1 1804   Chr05: 6532106-6533909
Gorai.008G013400 (1 of 1) PTHR31375:SF11 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN G. raimondii v2.1 2505   Chr08: 1553341-1555845
Gorai.006G076800 (1 of 55) 3.2.1.15 - Polygalacturonase / Pectinase G. raimondii v2.1 2114   Chr06: 30075645-30077758
Gorai.006G260500 (1 of 55) 3.2.1.15 - Polygalacturonase / Pectinase G. raimondii v2.1 2091   Chr06: 50119355-50121445
Gorai.011G193300 (1 of 55) 3.2.1.15 - Polygalacturonase / Pectinase G. raimondii v2.1 1867   Chr11: 46788109-46789975
Thecc1EG004700 (1 of 5) 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase T. cacao v1.1 2332   scaffold_1: 33047035-33049366
Thecc1EG007591 (1 of 1) PTHR31375//PTHR31375:SF11 - FAMILY NOT NAMED // GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN T. cacao v1.1 3884   scaffold_2: 7803030-7806913
Thecc1EG021260 (1 of 5) 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase T. cacao v1.1 2413   scaffold_4: 32373289-32375701
Thecc1EG046791 (1 of 12) K01213 - galacturan 1,4-alpha-galacturonidase (E3.2.1.67) T. cacao v1.1 2147   scaffold_4: 32376340-32378486
Araha.2653s0004 (1 of 1) PTHR31375:SF17 - EXOPOLYGALACTURONASE CLONE GBGE184 A. halleri v1.1 1533   Scaffold2653: 13938-15470
Araha.12146s0009 (1 of 1) PTHR31375:SF11 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN A. halleri v1.1 1711   Scaffold12146: 23707-25417

97 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Cucsa.205370.1 C. sativus v1.0 124071236 Pectin lyase-like superfamily protein 8 5270 Rosid
Cucsa.252840.1 C. sativus v1.0 124071236 Pectin lyase-like superfamily protein 8 5270 Rosid
Cucsa.357430.1 C. sativus v1.0 124071236 Pectin lyase-like superfamily protein 8 5270 Rosid
Thhalv10005587m E. salsugineum v1.0 124071236 Pectin lyase-like superfamily protein 3 5270 Rosid
Ciclev10023712m C. clementina v1.0 124071236 Pectin lyase-like superfamily protein 1 5270 Rosid
Lus10016824 L. usitatissimum v1.0 124071236 Pectin lyase-like superfamily protein 3 5270 Rosid
Gorai.011G193300.1 G. raimondii v2.1 124071236 Pectin lyase-like superfamily protein 5 5270 Rosid
Gorai.006G260500.1 G. raimondii v2.1 124071236 Pectin lyase-like superfamily protein 5 5270 Rosid
Thecc1EG046791t1 T. cacao v1.1 124071236 Pectin lyase-like superfamily protein 4 5270 Rosid
Araha.12146s0009.1.p A. halleri v1.1 124071236 Pectin lyase-like superfamily protein 2 5270 Rosid
Cagra.0566s0019.1.p C. grandiflora v1.1 124071236 Pectin lyase-like superfamily protein 2 5270 Rosid
Glyma.09G041600.1.p G. max Wm82.a2.v1 124071236 Pectin lyase-like superfamily protein 5 5270 Rosid
Glyma.07G245100.1.p G. max Wm82.a2.v1 124071236 Pectin lyase-like superfamily protein 5 5270 Rosid
Glyma.15G151900.1.p G. max Wm82.a2.v1 124071236 Pectin lyase-like superfamily protein 5 5270 Rosid
Glyma.15G151800.1.p G. max Wm82.a2.v1 124071236 Pectin lyase-like superfamily protein 5 5270 Rosid
Glyma.02G016300.1.p G. max Wm82.a2.v1 124071236 Pectin lyase-like superfamily protein 5 5270 Rosid
Brara.F02948.1.p B. rapa FPsc v1.3 124071236 Pectin lyase-like superfamily protein 5 5270 Rosid
Brara.H03108.1.p B. rapa FPsc v1.3 124071236 Pectin lyase-like superfamily protein 5 5270 Rosid
Medtr1g088160.1 M. truncatula Mt4.0v1 124071236 Pectin lyase-like superfamily protein 2 5270 Rosid
SapurV1A.0494s0040.1.p S. purpurea v1.0 124071236 Pectin lyase-like superfamily protein 7 5270 Rosid
SapurV1A.0264s0210.1.p S. purpurea v1.0 124071236 Pectin lyase-like superfamily protein 7 5270 Rosid
SapurV1A.0264s0080.1.p S. purpurea v1.0 124071236 Pectin lyase-like superfamily protein 7 5270 Rosid
Eucgr.H03964.1.p E. grandis v2.0 124071236 Pectin lyase-like superfamily protein 4 5270 Rosid
Eucgr.H05001.1.p E. grandis v2.0 124071236 Pectin lyase-like superfamily protein 4 5270 Rosid
Prupe.8G181300.1.p P. persica v2.1 124071236 Pectin lyase-like superfamily protein 4 5270 Rosid
Prupe.1G131100.1.p P. persica v2.1 124071236 Pectin lyase-like superfamily protein 4 5270 Rosid
Manes.15G010400.1.p M. esculenta v6.1 124071236 Pectin lyase-like superfamily protein 3 5270 Rosid
Phvul.003G107500.1.p P. vulgaris v2.1 124071236 Pectin lyase-like superfamily protein 3 5270 Rosid
Potri.010G011100.1.p P. trichocarpa v3.1 124071236 Pectin lyase-like superfamily protein 5 5270 Rosid
Podel.02G225000.1.p P. deltoides WV94 v2.1 124071236 Pectin lyase-like superfamily protein 5 5270 Rosid