Sequence Feature Displayer
Ontology Annotation Displayer
1 Pathways
Pathway Identifier | Organism Name | Analysis Method | Analysis Status |
---|---|---|---|
Athaliana PWY-1081 | Arabidopsis thaliana | pathologic |
Other
20 Flanking Regions
Region Name | Flank Size | Direction | Length | Gene Included? | Chromosome Location | Organism Name |
---|---|---|---|---|---|---|
AT4G18180 0.5kb upstream | 0.5kb | upstream | 2192 | true | Chr4: 10065126-10067317 | Arabidopsis thaliana |
AT4G18180 0.5kb upstream | 0.5kb | upstream | 500 | false | Chr4: 10065126-10065625 | Arabidopsis thaliana |
AT4G18180 0.5kb downstream | 0.5kb | downstream | 2192 | true | Chr4: 10065626-10067817 | Arabidopsis thaliana |
AT4G18180 0.5kb downstream | 0.5kb | downstream | 500 | false | Chr4: 10067318-10067817 | Arabidopsis thaliana |
AT4G18180 1.0kb upstream | 1.0kb | upstream | 2692 | true | Chr4: 10064626-10067317 | Arabidopsis thaliana |
AT4G18180 1.0kb upstream | 1.0kb | upstream | 1000 | false | Chr4: 10064626-10065625 | Arabidopsis thaliana |
AT4G18180 1.0kb downstream | 1.0kb | downstream | 2692 | true | Chr4: 10065626-10068317 | Arabidopsis thaliana |
AT4G18180 1.0kb downstream | 1.0kb | downstream | 1000 | false | Chr4: 10067318-10068317 | Arabidopsis thaliana |
AT4G18180 2.0kb upstream | 2.0kb | upstream | 3692 | true | Chr4: 10063626-10067317 | Arabidopsis thaliana |
AT4G18180 2.0kb upstream | 2.0kb | upstream | 2000 | false | Chr4: 10063626-10065625 | Arabidopsis thaliana |
AT4G18180 2.0kb downstream | 2.0kb | downstream | 3692 | true | Chr4: 10065626-10069317 | Arabidopsis thaliana |
AT4G18180 2.0kb downstream | 2.0kb | downstream | 2000 | false | Chr4: 10067318-10069317 | Arabidopsis thaliana |
AT4G18180 5.0kb upstream | 5.0kb | upstream | 6692 | true | Chr4: 10060626-10067317 | Arabidopsis thaliana |
AT4G18180 5.0kb upstream | 5.0kb | upstream | 5000 | false | Chr4: 10060626-10065625 | Arabidopsis thaliana |
AT4G18180 5.0kb downstream | 5.0kb | downstream | 6692 | true | Chr4: 10065626-10072317 | Arabidopsis thaliana |
AT4G18180 5.0kb downstream | 5.0kb | downstream | 5000 | false | Chr4: 10067318-10072317 | Arabidopsis thaliana |
AT4G18180 10.0kb upstream | 10.0kb | upstream | 11692 | true | Chr4: 10055626-10067317 | Arabidopsis thaliana |
AT4G18180 10.0kb upstream | 10.0kb | upstream | 10000 | false | Chr4: 10055626-10065625 | Arabidopsis thaliana |
AT4G18180 10.0kb downstream | 10.0kb | downstream | 11692 | true | Chr4: 10065626-10077317 | Arabidopsis thaliana |
AT4G18180 10.0kb downstream | 10.0kb | downstream | 10000 | false | Chr4: 10067318-10077317 | Arabidopsis thaliana |
10 Protein Familys
Cluster ID | Method ID | Method Name | Sequence Alignment |
---|---|---|---|
122361065 | 5261 | Brassicaceae | View MSA |
123831116 | 5264 | Brassicales-Malvales | View MSA |
124321711 | 5266 | SBM | View MSA |
124251239 | 5268 | Malvidae | View MSA |
124071236 | 5270 | Rosid | View MSA |
123746324 | 5271 | Pentapetalae | View MSA |
122797497 | 5272 | Eudicot | View MSA |
122051291 | 5273 | Angiosperm | View MSA |
121350352 | 5274 | Embryophyte | View MSA |
123381691 | 5275 | Viridiplantae | View MSA |
6 Rna Seq Expressionss
Analysis Method | Abundance | Low Confidence Limit | High Confidence Limit | Relative Library Expression | Relative Locus Expression |
---|---|---|---|---|---|
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.009 | Low | |||
cufflinks | 0.008 | Low | Low | ||
cufflinks | 0.009 | Low | |||
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.0 | Not Expressed | Not Expressed |