Protein Family : polygalacturonase 4 124251239

Method ID:  5268 Method Name:  Malvidae
Sequence Alignment:  View MSA Member Count:  55
Paste the following link

55 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29726.t000202 (1 of 1) 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase R. communis v0.1 2137   29726: 1149137-1151273
orange1.1g043757m.g (1 of 5) 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase C. sinensis v1.1 1830   scaffold00001: 4870360-4872189
AT4G18180 (1 of 1) PTHR31375//PTHR31375:SF11 - FAMILY NOT NAMED // GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN A. thaliana TAIR10 1692   Chr4: 10065626-10067317
AT1G02790 (1 of 1) PTHR31375:SF17 - EXOPOLYGALACTURONASE CLONE GBGE184 A. thaliana TAIR10 PGA4 1934   Chr1: 610391-612324
Thhalv10027030m.g (1 of 1) PTHR31375:SF11 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN E. salsugineum v1.0 2055   scaffold_1: 9587201-9589255
Thhalv10007721m.g (1 of 1) PTHR31375:SF17 - EXOPOLYGALACTURONASE CLONE GBGE184 E. salsugineum v1.0 1943   scaffold_5: 14999355-15001297
Thhalv10005587m.g (1 of 52) 3.2.1.15 - Polygalacturonase / Pectinase E. salsugineum v1.0 1822   scaffold_6: 4706467-4708288
Ciclev10023712m.g (1 of 4) 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase C. clementina v1.0 1819   scaffold_3: 46025851-46027669
Lus10016824.g (1 of 79) 3.2.1.15 - Polygalacturonase / Pectinase L. usitatissimum v1.0 1666   scaffold153: 41636-43301
Lus10012489.g (1 of 3) 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase L. usitatissimum v1.0 1971   scaffold660: 292807-294777
Lus10003782.g (1 of 3) 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase L. usitatissimum v1.0 1804   scaffold89: 19344-21147
Gorai.005G061900 (1 of 55) 3.2.1.15 - Polygalacturonase / Pectinase G. raimondii v2.1 1804   Chr05: 6532106-6533909
Gorai.008G013400 (1 of 1) PTHR31375:SF11 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN G. raimondii v2.1 2505   Chr08: 1553341-1555845
Gorai.006G076800 (1 of 55) 3.2.1.15 - Polygalacturonase / Pectinase G. raimondii v2.1 2114   Chr06: 30075645-30077758
Gorai.006G260500 (1 of 55) 3.2.1.15 - Polygalacturonase / Pectinase G. raimondii v2.1 2091   Chr06: 50119355-50121445
Gorai.011G193300 (1 of 55) 3.2.1.15 - Polygalacturonase / Pectinase G. raimondii v2.1 1867   Chr11: 46788109-46789975
Thecc1EG004700 (1 of 5) 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase T. cacao v1.1 2332   scaffold_1: 33047035-33049366
Thecc1EG007591 (1 of 1) PTHR31375//PTHR31375:SF11 - FAMILY NOT NAMED // GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN T. cacao v1.1 3884   scaffold_2: 7803030-7806913
Thecc1EG021260 (1 of 5) 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase T. cacao v1.1 2413   scaffold_4: 32373289-32375701
Thecc1EG046791 (1 of 12) K01213 - galacturan 1,4-alpha-galacturonidase (E3.2.1.67) T. cacao v1.1 2147   scaffold_4: 32376340-32378486
Araha.2653s0004 (1 of 1) PTHR31375:SF17 - EXOPOLYGALACTURONASE CLONE GBGE184 A. halleri v1.1 1533   Scaffold2653: 13938-15470
Araha.12146s0009 (1 of 1) PTHR31375:SF11 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN A. halleri v1.1 1711   Scaffold12146: 23707-25417
Cagra.0566s0019 (1 of 1) PTHR31375:SF17 - EXOPOLYGALACTURONASE CLONE GBGE184 C. grandiflora v1.1 1552   Scaffold566: 55688-57239
Cagra.1595s0015 (1 of 1) PTHR31375:SF11 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN C. grandiflora v1.1 1838   Scaffold1595: 73338-75175
Brara.F02948 (1 of 76) 3.2.1.15 - Polygalacturonase / Pectinase B. rapa FPsc v1.3 1542   A06: 23842532-23844073
Brara.H01988 (1 of 4) PTHR31375:SF17 - EXOPOLYGALACTURONASE CLONE GBGE184 B. rapa FPsc v1.3 1742   A08: 18234639-18236380
Brara.H03108 (1 of 4) PTHR31375:SF17 - EXOPOLYGALACTURONASE CLONE GBGE184 B. rapa FPsc v1.3 1910   A08: 23057891-23059800
Brara.I05559 (1 of 4) PTHR31375:SF17 - EXOPOLYGALACTURONASE CLONE GBGE184 B. rapa FPsc v1.3 1629   A09: 44497298-44498926
Brara.K00458 (1 of 1) PTHR31375:SF11 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN B. rapa FPsc v1.3 1845   Scaffold18850: 268574-270418
Bostr.30275s0284 (1 of 1) PTHR31375:SF11 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN B. stricta v1.2 2097   Scaffold30275: 1806588-1808684

55 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
29726.m004090 R. communis v0.1 124251239 polygalacturonase 4 1 5268 Malvidae
Thhalv10005587m E. salsugineum v1.0 124251239 polygalacturonase 4 3 5268 Malvidae
Ciclev10023712m C. clementina v1.0 124251239 polygalacturonase 4 1 5268 Malvidae
Lus10016824 L. usitatissimum v1.0 124251239 polygalacturonase 4 3 5268 Malvidae
Gorai.011G193300.1 G. raimondii v2.1 124251239 polygalacturonase 4 5 5268 Malvidae
Gorai.006G260500.1 G. raimondii v2.1 124251239 polygalacturonase 4 5 5268 Malvidae
Thecc1EG004700t1 T. cacao v1.1 124251239 polygalacturonase 4 4 5268 Malvidae
Thecc1EG046791t1 T. cacao v1.1 124251239 polygalacturonase 4 4 5268 Malvidae
Araha.12146s0009.1.p A. halleri v1.1 124251239 polygalacturonase 4 2 5268 Malvidae
Cagra.0566s0019.1.p C. grandiflora v1.1 124251239 polygalacturonase 4 2 5268 Malvidae
Brara.F02948.1.p B. rapa FPsc v1.3 124251239 polygalacturonase 4 5 5268 Malvidae
Brara.H03108.1.p B. rapa FPsc v1.3 124251239 polygalacturonase 4 5 5268 Malvidae
SapurV1A.0494s0040.1.p S. purpurea v1.0 124251239 polygalacturonase 4 7 5268 Malvidae
SapurV1A.0264s0210.1.p S. purpurea v1.0 124251239 polygalacturonase 4 7 5268 Malvidae
SapurV1A.0264s0080.1.p S. purpurea v1.0 124251239 polygalacturonase 4 7 5268 Malvidae
Manes.15G010400.1.p M. esculenta v6.1 124251239 polygalacturonase 4 3 5268 Malvidae
Potri.010G011100.1.p P. trichocarpa v3.1 124251239 polygalacturonase 4 5 5268 Malvidae
Podel.02G225000.1.p P. deltoides WV94 v2.1 124251239 polygalacturonase 4 5 5268 Malvidae
Podel.02G224900.1.p P. deltoides WV94 v2.1 124251239 polygalacturonase 4 5 5268 Malvidae
Podel.10G008500.1.p P. deltoides WV94 v2.1 124251239 polygalacturonase 4 5 5268 Malvidae
orange1.1g043757m C. sinensis v1.1 124251239 polygalacturonase 4 1 5268 Malvidae
AT1G02790.1 A. thaliana TAIR10 124251239 polygalacturonase 4 2 5268 Malvidae
AT4G18180.1 A. thaliana TAIR10 124251239 polygalacturonase 4 2 5268 Malvidae
Thhalv10027030m E. salsugineum v1.0 124251239 polygalacturonase 4 3 5268 Malvidae
Thhalv10007721m E. salsugineum v1.0 124251239 polygalacturonase 4 3 5268 Malvidae
Lus10012489 L. usitatissimum v1.0 124251239 polygalacturonase 4 3 5268 Malvidae
Lus10003782 L. usitatissimum v1.0 124251239 polygalacturonase 4 3 5268 Malvidae
Gorai.006G076800.1 G. raimondii v2.1 124251239 polygalacturonase 4 5 5268 Malvidae
Gorai.005G061900.1 G. raimondii v2.1 124251239 polygalacturonase 4 5 5268 Malvidae
Gorai.008G013400.1 G. raimondii v2.1 124251239 polygalacturonase 4 5 5268 Malvidae