Gene : Lus10003782.g L. usitatissimum v1.0
Defline:  (1 of 3) 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase Genomic Order:  1
Name:  ? Lus10003782.g Secondary Identifier:  ? PAC:23157505
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum PWY-1081 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10003782.g 0.5kb upstream 0.5kb upstream 2304 true scaffold89: 19344-21647 Linum usitatissimum
Lus10003782.g 0.5kb upstream 0.5kb upstream 500 false scaffold89: 21148-21647 Linum usitatissimum
Lus10003782.g 0.5kb downstream 0.5kb downstream 2304 true scaffold89: 18844-21147 Linum usitatissimum
Lus10003782.g 0.5kb downstream 0.5kb downstream 500 false scaffold89: 18844-19343 Linum usitatissimum
Lus10003782.g 1.0kb upstream 1.0kb upstream 2804 true scaffold89: 19344-22147 Linum usitatissimum
Lus10003782.g 1.0kb upstream 1.0kb upstream 1000 false scaffold89: 21148-22147 Linum usitatissimum
Lus10003782.g 1.0kb downstream 1.0kb downstream 2804 true scaffold89: 18344-21147 Linum usitatissimum
Lus10003782.g 1.0kb downstream 1.0kb downstream 1000 false scaffold89: 18344-19343 Linum usitatissimum
Lus10003782.g 2.0kb upstream 2.0kb upstream 3804 true scaffold89: 19344-23147 Linum usitatissimum
Lus10003782.g 2.0kb upstream 2.0kb upstream 2000 false scaffold89: 21148-23147 Linum usitatissimum
Lus10003782.g 2.0kb downstream 2.0kb downstream 3804 true scaffold89: 17344-21147 Linum usitatissimum
Lus10003782.g 2.0kb downstream 2.0kb downstream 2000 false scaffold89: 17344-19343 Linum usitatissimum
Lus10003782.g 5.0kb upstream 5.0kb upstream 6804 true scaffold89: 19344-26147 Linum usitatissimum
Lus10003782.g 5.0kb upstream 5.0kb upstream 5000 false scaffold89: 21148-26147 Linum usitatissimum
Lus10003782.g 5.0kb downstream 5.0kb downstream 6804 true scaffold89: 14344-21147 Linum usitatissimum
Lus10003782.g 5.0kb downstream 5.0kb downstream 5000 false scaffold89: 14344-19343 Linum usitatissimum
Lus10003782.g 10.0kb upstream 10.0kb upstream 11804 true scaffold89: 19344-31147 Linum usitatissimum
Lus10003782.g 10.0kb upstream 10.0kb upstream 10000 false scaffold89: 21148-31147 Linum usitatissimum
Lus10003782.g 10.0kb downstream 10.0kb downstream 11804 true scaffold89: 9344-21147 Linum usitatissimum
Lus10003782.g 10.0kb downstream 10.0kb downstream 10000 false scaffold89: 9344-19343 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122390582 5262 Malpighiales View MSA
124251239 5268 Malvidae View MSA
124071236 5270 Rosid View MSA
123746324 5271 Pentapetalae View MSA
122797497 5272 Eudicot View MSA
122051291 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain