Gene : Araha.12146s0009 A. halleri v1.1
Defline:  (1 of 1) PTHR31375:SF11 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN Genomic Order:  9
Name:  ? Araha.12146s0009 Secondary Identifier:  ? PAC:28848576
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-1081 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.12146s0009 0.5kb upstream 0.5kb upstream 2211 true Scaffold12146: 23707-25917 Arabidopsis halleri
Araha.12146s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold12146: 25418-25917 Arabidopsis halleri
Araha.12146s0009 0.5kb downstream 0.5kb downstream 2211 true Scaffold12146: 23207-25417 Arabidopsis halleri
Araha.12146s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold12146: 23207-23706 Arabidopsis halleri
Araha.12146s0009 1.0kb upstream 1.0kb upstream 2711 true Scaffold12146: 23707-26417 Arabidopsis halleri
Araha.12146s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold12146: 25418-26417 Arabidopsis halleri
Araha.12146s0009 1.0kb downstream 1.0kb downstream 2711 true Scaffold12146: 22707-25417 Arabidopsis halleri
Araha.12146s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold12146: 22707-23706 Arabidopsis halleri
Araha.12146s0009 2.0kb upstream 2.0kb upstream 3711 true Scaffold12146: 23707-27417 Arabidopsis halleri
Araha.12146s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold12146: 25418-27417 Arabidopsis halleri
Araha.12146s0009 2.0kb downstream 2.0kb downstream 3711 true Scaffold12146: 21707-25417 Arabidopsis halleri
Araha.12146s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold12146: 21707-23706 Arabidopsis halleri
Araha.12146s0009 5.0kb upstream 5.0kb upstream 6711 true Scaffold12146: 23707-30417 Arabidopsis halleri
Araha.12146s0009 5.0kb upstream 5.0kb upstream 5000 false Scaffold12146: 25418-30417 Arabidopsis halleri
Araha.12146s0009 5.0kb downstream 5.0kb downstream 6711 true Scaffold12146: 18707-25417 Arabidopsis halleri
Araha.12146s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold12146: 18707-23706 Arabidopsis halleri
Araha.12146s0009 10.0kb upstream 10.0kb upstream 11711 true Scaffold12146: 23707-35417 Arabidopsis halleri
Araha.12146s0009 10.0kb upstream 10.0kb upstream 10000 false Scaffold12146: 25418-35417 Arabidopsis halleri
Araha.12146s0009 10.0kb downstream 10.0kb downstream 11711 true Scaffold12146: 13707-25417 Arabidopsis halleri
Araha.12146s0009 10.0kb downstream 10.0kb downstream 10000 false Scaffold12146: 13707-23706 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361065 5261 Brassicaceae View MSA
123831116 5264 Brassicales-Malvales View MSA
124321711 5266 SBM View MSA
124251239 5268 Malvidae View MSA
124071236 5270 Rosid View MSA
123746324 5271 Pentapetalae View MSA
122797497 5272 Eudicot View MSA
122051291 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain