Gene : Gorai.011G193300 G. raimondii v2.1
Defline:  (1 of 55) 3.2.1.15 - Polygalacturonase / Pectinase Genomic Order:  1933
Name:  ? Gorai.011G193300 Secondary Identifier:  ? PAC:26811159
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-1081 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.011G193300 0.5kb upstream 0.5kb upstream 2367 true Chr11: 46787609-46789975 Gossypium raimondii
Gorai.011G193300 0.5kb upstream 0.5kb upstream 500 false Chr11: 46787609-46788108 Gossypium raimondii
Gorai.011G193300 0.5kb downstream 0.5kb downstream 2367 true Chr11: 46788109-46790475 Gossypium raimondii
Gorai.011G193300 0.5kb downstream 0.5kb downstream 500 false Chr11: 46789976-46790475 Gossypium raimondii
Gorai.011G193300 1.0kb upstream 1.0kb upstream 2867 true Chr11: 46787109-46789975 Gossypium raimondii
Gorai.011G193300 1.0kb upstream 1.0kb upstream 1000 false Chr11: 46787109-46788108 Gossypium raimondii
Gorai.011G193300 1.0kb downstream 1.0kb downstream 2867 true Chr11: 46788109-46790975 Gossypium raimondii
Gorai.011G193300 1.0kb downstream 1.0kb downstream 1000 false Chr11: 46789976-46790975 Gossypium raimondii
Gorai.011G193300 2.0kb upstream 2.0kb upstream 3867 true Chr11: 46786109-46789975 Gossypium raimondii
Gorai.011G193300 2.0kb upstream 2.0kb upstream 2000 false Chr11: 46786109-46788108 Gossypium raimondii
Gorai.011G193300 2.0kb downstream 2.0kb downstream 3867 true Chr11: 46788109-46791975 Gossypium raimondii
Gorai.011G193300 2.0kb downstream 2.0kb downstream 2000 false Chr11: 46789976-46791975 Gossypium raimondii
Gorai.011G193300 5.0kb upstream 5.0kb upstream 6867 true Chr11: 46783109-46789975 Gossypium raimondii
Gorai.011G193300 5.0kb upstream 5.0kb upstream 5000 false Chr11: 46783109-46788108 Gossypium raimondii
Gorai.011G193300 5.0kb downstream 5.0kb downstream 6867 true Chr11: 46788109-46794975 Gossypium raimondii
Gorai.011G193300 5.0kb downstream 5.0kb downstream 5000 false Chr11: 46789976-46794975 Gossypium raimondii
Gorai.011G193300 10.0kb upstream 10.0kb upstream 11867 true Chr11: 46778109-46789975 Gossypium raimondii
Gorai.011G193300 10.0kb upstream 10.0kb upstream 10000 false Chr11: 46778109-46788108 Gossypium raimondii
Gorai.011G193300 10.0kb downstream 10.0kb downstream 11867 true Chr11: 46788109-46799975 Gossypium raimondii
Gorai.011G193300 10.0kb downstream 10.0kb downstream 10000 false Chr11: 46789976-46799975 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838486 5264 Brassicales-Malvales View MSA
124322465 5266 SBM View MSA
124251239 5268 Malvidae View MSA
124071236 5270 Rosid View MSA
123746324 5271 Pentapetalae View MSA
122797497 5272 Eudicot View MSA
122051291 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain