Gene : Bostr.30275s0284 B. stricta v1.2
Defline:  (1 of 1) PTHR31375:SF11 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN Genomic Order:  284
Name:  ? Bostr.30275s0284 Secondary Identifier:  ? PAC:30665288
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-1081 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.30275s0284 0.5kb upstream 0.5kb upstream 2597 true Scaffold30275: 1806088-1808684 Boechera stricta
Bostr.30275s0284 0.5kb upstream 0.5kb upstream 500 false Scaffold30275: 1806088-1806587 Boechera stricta
Bostr.30275s0284 0.5kb downstream 0.5kb downstream 2597 true Scaffold30275: 1806588-1809184 Boechera stricta
Bostr.30275s0284 0.5kb downstream 0.5kb downstream 500 false Scaffold30275: 1808685-1809184 Boechera stricta
Bostr.30275s0284 1.0kb upstream 1.0kb upstream 3097 true Scaffold30275: 1805588-1808684 Boechera stricta
Bostr.30275s0284 1.0kb upstream 1.0kb upstream 1000 false Scaffold30275: 1805588-1806587 Boechera stricta
Bostr.30275s0284 1.0kb downstream 1.0kb downstream 3097 true Scaffold30275: 1806588-1809684 Boechera stricta
Bostr.30275s0284 1.0kb downstream 1.0kb downstream 1000 false Scaffold30275: 1808685-1809684 Boechera stricta
Bostr.30275s0284 2.0kb upstream 2.0kb upstream 4097 true Scaffold30275: 1804588-1808684 Boechera stricta
Bostr.30275s0284 2.0kb upstream 2.0kb upstream 2000 false Scaffold30275: 1804588-1806587 Boechera stricta
Bostr.30275s0284 2.0kb downstream 2.0kb downstream 4097 true Scaffold30275: 1806588-1810684 Boechera stricta
Bostr.30275s0284 2.0kb downstream 2.0kb downstream 2000 false Scaffold30275: 1808685-1810684 Boechera stricta
Bostr.30275s0284 5.0kb upstream 5.0kb upstream 7097 true Scaffold30275: 1801588-1808684 Boechera stricta
Bostr.30275s0284 5.0kb upstream 5.0kb upstream 5000 false Scaffold30275: 1801588-1806587 Boechera stricta
Bostr.30275s0284 5.0kb downstream 5.0kb downstream 7097 true Scaffold30275: 1806588-1813684 Boechera stricta
Bostr.30275s0284 5.0kb downstream 5.0kb downstream 5000 false Scaffold30275: 1808685-1813684 Boechera stricta
Bostr.30275s0284 10.0kb upstream 10.0kb upstream 12097 true Scaffold30275: 1796588-1808684 Boechera stricta
Bostr.30275s0284 10.0kb upstream 10.0kb upstream 10000 false Scaffold30275: 1796588-1806587 Boechera stricta
Bostr.30275s0284 10.0kb downstream 10.0kb downstream 12097 true Scaffold30275: 1806588-1818684 Boechera stricta
Bostr.30275s0284 10.0kb downstream 10.0kb downstream 10000 false Scaffold30275: 1808685-1818684 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361065 5261 Brassicaceae View MSA
123831116 5264 Brassicales-Malvales View MSA
124321711 5266 SBM View MSA
124251239 5268 Malvidae View MSA
124071236 5270 Rosid View MSA
123746324 5271 Pentapetalae View MSA
122797497 5272 Eudicot View MSA
122051291 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain