Gene : Thecc1EG046791 T. cacao v1.1
Defline:  (1 of 12) K01213 - galacturan 1,4-alpha-galacturonidase (E3.2.1.67) Genomic Order:  2910
Name:  ? Thecc1EG046791 Secondary Identifier:  ? PAC:27452396
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-1081 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG046791 0.5kb upstream 0.5kb upstream 2647 true scaffold_4: 32375840-32378486 Theobroma cacao
Thecc1EG046791 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 32375840-32376339 Theobroma cacao
Thecc1EG046791 0.5kb downstream 0.5kb downstream 2647 true scaffold_4: 32376340-32378986 Theobroma cacao
Thecc1EG046791 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 32378487-32378986 Theobroma cacao
Thecc1EG046791 1.0kb upstream 1.0kb upstream 3147 true scaffold_4: 32375340-32378486 Theobroma cacao
Thecc1EG046791 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 32375340-32376339 Theobroma cacao
Thecc1EG046791 1.0kb downstream 1.0kb downstream 3147 true scaffold_4: 32376340-32379486 Theobroma cacao
Thecc1EG046791 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 32378487-32379486 Theobroma cacao
Thecc1EG046791 2.0kb upstream 2.0kb upstream 4147 true scaffold_4: 32374340-32378486 Theobroma cacao
Thecc1EG046791 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 32374340-32376339 Theobroma cacao
Thecc1EG046791 2.0kb downstream 2.0kb downstream 4147 true scaffold_4: 32376340-32380486 Theobroma cacao
Thecc1EG046791 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 32378487-32380486 Theobroma cacao
Thecc1EG046791 5.0kb upstream 5.0kb upstream 7147 true scaffold_4: 32371340-32378486 Theobroma cacao
Thecc1EG046791 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 32371340-32376339 Theobroma cacao
Thecc1EG046791 5.0kb downstream 5.0kb downstream 7147 true scaffold_4: 32376340-32383486 Theobroma cacao
Thecc1EG046791 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 32378487-32383486 Theobroma cacao
Thecc1EG046791 10.0kb upstream 10.0kb upstream 12147 true scaffold_4: 32366340-32378486 Theobroma cacao
Thecc1EG046791 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 32366340-32376339 Theobroma cacao
Thecc1EG046791 10.0kb downstream 10.0kb downstream 12147 true scaffold_4: 32376340-32388486 Theobroma cacao
Thecc1EG046791 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 32378487-32388486 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838486 5264 Brassicales-Malvales View MSA
124322465 5266 SBM View MSA
124251239 5268 Malvidae View MSA
124071236 5270 Rosid View MSA
123746324 5271 Pentapetalae View MSA
122797497 5272 Eudicot View MSA
122051291 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain