Gene : Brara.H03108 B. rapa FPsc v1.3
Defline:  (1 of 4) PTHR31375:SF17 - EXOPOLYGALACTURONASE CLONE GBGE184 Genomic Order:  3108
Name:  ? Brara.H03108 Secondary Identifier:  ? PAC:30647370
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-1081 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.H03108 0.5kb upstream 0.5kb upstream 2410 true A08: 23057391-23059800 Brassica rapa FPsc
Brara.H03108 0.5kb upstream 0.5kb upstream 500 false A08: 23057391-23057890 Brassica rapa FPsc
Brara.H03108 0.5kb downstream 0.5kb downstream 2410 true A08: 23057891-23060300 Brassica rapa FPsc
Brara.H03108 0.5kb downstream 0.5kb downstream 500 false A08: 23059801-23060300 Brassica rapa FPsc
Brara.H03108 1.0kb upstream 1.0kb upstream 2910 true A08: 23056891-23059800 Brassica rapa FPsc
Brara.H03108 1.0kb upstream 1.0kb upstream 1000 false A08: 23056891-23057890 Brassica rapa FPsc
Brara.H03108 1.0kb downstream 1.0kb downstream 2910 true A08: 23057891-23060800 Brassica rapa FPsc
Brara.H03108 1.0kb downstream 1.0kb downstream 1000 false A08: 23059801-23060800 Brassica rapa FPsc
Brara.H03108 2.0kb upstream 2.0kb upstream 3910 true A08: 23055891-23059800 Brassica rapa FPsc
Brara.H03108 2.0kb upstream 2.0kb upstream 2000 false A08: 23055891-23057890 Brassica rapa FPsc
Brara.H03108 2.0kb downstream 2.0kb downstream 3910 true A08: 23057891-23061800 Brassica rapa FPsc
Brara.H03108 2.0kb downstream 2.0kb downstream 2000 false A08: 23059801-23061800 Brassica rapa FPsc
Brara.H03108 5.0kb upstream 5.0kb upstream 6910 true A08: 23052891-23059800 Brassica rapa FPsc
Brara.H03108 5.0kb upstream 5.0kb upstream 5000 false A08: 23052891-23057890 Brassica rapa FPsc
Brara.H03108 5.0kb downstream 5.0kb downstream 6910 true A08: 23057891-23064800 Brassica rapa FPsc
Brara.H03108 5.0kb downstream 5.0kb downstream 5000 false A08: 23059801-23064800 Brassica rapa FPsc
Brara.H03108 10.0kb upstream 10.0kb upstream 11910 true A08: 23047891-23059800 Brassica rapa FPsc
Brara.H03108 10.0kb upstream 10.0kb upstream 10000 false A08: 23047891-23057890 Brassica rapa FPsc
Brara.H03108 10.0kb downstream 10.0kb downstream 11910 true A08: 23057891-23069800 Brassica rapa FPsc
Brara.H03108 10.0kb downstream 10.0kb downstream 10000 false A08: 23059801-23069800 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369949 5261 Brassicaceae View MSA
123837195 5264 Brassicales-Malvales View MSA
124351159 5266 SBM View MSA
124251239 5268 Malvidae View MSA
124071236 5270 Rosid View MSA
123746324 5271 Pentapetalae View MSA
122797497 5272 Eudicot View MSA
122051291 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier