Gene : Cucsa.205410 C. sativus v1.0
Defline:  (1 of 12) 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase Genomic Order:  59
Name:  ? Cucsa.205410 Secondary Identifier:  ? PAC:16969100
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-1081 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.205410 0.5kb upstream 0.5kb upstream 2707 true scaffold01416: 517980-520686 Cucumis sativus
Cucsa.205410 0.5kb upstream 0.5kb upstream 500 false scaffold01416: 517980-518479 Cucumis sativus
Cucsa.205410 0.5kb downstream 0.5kb downstream 2707 true scaffold01416: 518480-521186 Cucumis sativus
Cucsa.205410 0.5kb downstream 0.5kb downstream 500 false scaffold01416: 520687-521186 Cucumis sativus
Cucsa.205410 1.0kb upstream 1.0kb upstream 3207 true scaffold01416: 517480-520686 Cucumis sativus
Cucsa.205410 1.0kb upstream 1.0kb upstream 1000 false scaffold01416: 517480-518479 Cucumis sativus
Cucsa.205410 1.0kb downstream 1.0kb downstream 3207 true scaffold01416: 518480-521686 Cucumis sativus
Cucsa.205410 1.0kb downstream 1.0kb downstream 1000 false scaffold01416: 520687-521686 Cucumis sativus
Cucsa.205410 2.0kb upstream 2.0kb upstream 4207 true scaffold01416: 516480-520686 Cucumis sativus
Cucsa.205410 2.0kb upstream 2.0kb upstream 2000 false scaffold01416: 516480-518479 Cucumis sativus
Cucsa.205410 2.0kb downstream 2.0kb downstream 4207 true scaffold01416: 518480-522686 Cucumis sativus
Cucsa.205410 2.0kb downstream 2.0kb downstream 2000 false scaffold01416: 520687-522686 Cucumis sativus
Cucsa.205410 5.0kb upstream 5.0kb upstream 7207 true scaffold01416: 513480-520686 Cucumis sativus
Cucsa.205410 5.0kb upstream 5.0kb upstream 5000 false scaffold01416: 513480-518479 Cucumis sativus
Cucsa.205410 5.0kb downstream 5.0kb downstream 7207 true scaffold01416: 518480-525686 Cucumis sativus
Cucsa.205410 5.0kb downstream 5.0kb downstream 5000 false scaffold01416: 520687-525686 Cucumis sativus
Cucsa.205410 10.0kb upstream 10.0kb upstream 12207 true scaffold01416: 508480-520686 Cucumis sativus
Cucsa.205410 10.0kb upstream 10.0kb upstream 10000 false scaffold01416: 508480-518479 Cucumis sativus
Cucsa.205410 10.0kb downstream 10.0kb downstream 12207 true scaffold01416: 518480-530686 Cucumis sativus
Cucsa.205410 10.0kb downstream 10.0kb downstream 10000 false scaffold01416: 520687-530686 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309648 5265 Fabidae View MSA
124071236 5270 Rosid View MSA
123746324 5271 Pentapetalae View MSA
122797497 5272 Eudicot View MSA
122051291 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain