Gene : Cucsa.356870 C. sativus v1.0
Defline:  (1 of 1) PTHR10314:SF98 - TRYPTOPHAN SYNTHASE BETA CHAIN 1, CHLOROPLASTIC-RELATED Genomic Order:  131
Name:  ? Cucsa.356870 Secondary Identifier:  ? PAC:16980357
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus TRPSYN-PWY Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.356870 0.5kb upstream 0.5kb upstream 4337 true scaffold03577: 1786302-1790638 Cucumis sativus
Cucsa.356870 0.5kb upstream 0.5kb upstream 500 false scaffold03577: 1786302-1786801 Cucumis sativus
Cucsa.356870 0.5kb downstream 0.5kb downstream 4337 true scaffold03577: 1786802-1791138 Cucumis sativus
Cucsa.356870 0.5kb downstream 0.5kb downstream 500 false scaffold03577: 1790639-1791138 Cucumis sativus
Cucsa.356870 1.0kb upstream 1.0kb upstream 4837 true scaffold03577: 1785802-1790638 Cucumis sativus
Cucsa.356870 1.0kb upstream 1.0kb upstream 1000 false scaffold03577: 1785802-1786801 Cucumis sativus
Cucsa.356870 1.0kb downstream 1.0kb downstream 4837 true scaffold03577: 1786802-1791638 Cucumis sativus
Cucsa.356870 1.0kb downstream 1.0kb downstream 1000 false scaffold03577: 1790639-1791638 Cucumis sativus
Cucsa.356870 2.0kb upstream 2.0kb upstream 5837 true scaffold03577: 1784802-1790638 Cucumis sativus
Cucsa.356870 2.0kb upstream 2.0kb upstream 2000 false scaffold03577: 1784802-1786801 Cucumis sativus
Cucsa.356870 2.0kb downstream 2.0kb downstream 5837 true scaffold03577: 1786802-1792638 Cucumis sativus
Cucsa.356870 2.0kb downstream 2.0kb downstream 2000 false scaffold03577: 1790639-1792638 Cucumis sativus
Cucsa.356870 5.0kb upstream 5.0kb upstream 8837 true scaffold03577: 1781802-1790638 Cucumis sativus
Cucsa.356870 5.0kb upstream 5.0kb upstream 5000 false scaffold03577: 1781802-1786801 Cucumis sativus
Cucsa.356870 5.0kb downstream 5.0kb downstream 8837 true scaffold03577: 1786802-1795638 Cucumis sativus
Cucsa.356870 5.0kb downstream 5.0kb downstream 5000 false scaffold03577: 1790639-1795638 Cucumis sativus
Cucsa.356870 10.0kb upstream 10.0kb upstream 13837 true scaffold03577: 1776802-1790638 Cucumis sativus
Cucsa.356870 10.0kb upstream 10.0kb upstream 10000 false scaffold03577: 1776802-1786801 Cucumis sativus
Cucsa.356870 10.0kb downstream 10.0kb downstream 13837 true scaffold03577: 1786802-1800638 Cucumis sativus
Cucsa.356870 10.0kb downstream 10.0kb downstream 10000 false scaffold03577: 1790639-1800638 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304210 5265 Fabidae View MSA
124062384 5270 Rosid View MSA
123745831 5271 Pentapetalae View MSA
122787401 5272 Eudicot View MSA
122044231 5273 Angiosperm View MSA
121344651 5274 Embryophyte View MSA
123423776 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain