Gene : Cucsa.073340 C. sativus v1.0
Defline:  (1 of 1) PTHR30603:SF14 - RNA POLYMERASE SIGMA FACTOR SIGA Genomic Order:  79
Name:  ? Cucsa.073340 Secondary Identifier:  ? PAC:16955601
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.073340 0.5kb upstream 0.5kb upstream 3948 true scaffold00765: 931784-935731 Cucumis sativus
Cucsa.073340 0.5kb upstream 0.5kb upstream 500 false scaffold00765: 931784-932283 Cucumis sativus
Cucsa.073340 0.5kb downstream 0.5kb downstream 3948 true scaffold00765: 932284-936231 Cucumis sativus
Cucsa.073340 0.5kb downstream 0.5kb downstream 500 false scaffold00765: 935732-936231 Cucumis sativus
Cucsa.073340 1.0kb upstream 1.0kb upstream 4448 true scaffold00765: 931284-935731 Cucumis sativus
Cucsa.073340 1.0kb upstream 1.0kb upstream 1000 false scaffold00765: 931284-932283 Cucumis sativus
Cucsa.073340 1.0kb downstream 1.0kb downstream 4448 true scaffold00765: 932284-936731 Cucumis sativus
Cucsa.073340 1.0kb downstream 1.0kb downstream 1000 false scaffold00765: 935732-936731 Cucumis sativus
Cucsa.073340 2.0kb upstream 2.0kb upstream 5448 true scaffold00765: 930284-935731 Cucumis sativus
Cucsa.073340 2.0kb upstream 2.0kb upstream 2000 false scaffold00765: 930284-932283 Cucumis sativus
Cucsa.073340 2.0kb downstream 2.0kb downstream 5448 true scaffold00765: 932284-937731 Cucumis sativus
Cucsa.073340 2.0kb downstream 2.0kb downstream 2000 false scaffold00765: 935732-937731 Cucumis sativus
Cucsa.073340 5.0kb upstream 5.0kb upstream 8448 true scaffold00765: 927284-935731 Cucumis sativus
Cucsa.073340 5.0kb upstream 5.0kb upstream 5000 false scaffold00765: 927284-932283 Cucumis sativus
Cucsa.073340 5.0kb downstream 5.0kb downstream 8448 true scaffold00765: 932284-940731 Cucumis sativus
Cucsa.073340 5.0kb downstream 5.0kb downstream 5000 false scaffold00765: 935732-940731 Cucumis sativus
Cucsa.073340 10.0kb upstream 10.0kb upstream 13448 true scaffold00765: 922284-935731 Cucumis sativus
Cucsa.073340 10.0kb upstream 10.0kb upstream 10000 false scaffold00765: 922284-932283 Cucumis sativus
Cucsa.073340 10.0kb downstream 10.0kb downstream 13448 true scaffold00765: 932284-945731 Cucumis sativus
Cucsa.073340 10.0kb downstream 10.0kb downstream 10000 false scaffold00765: 935732-945731 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301612 5265 Fabidae View MSA
124062387 5270 Rosid View MSA
123751324 5271 Pentapetalae View MSA
122790966 5272 Eudicot View MSA
122043866 5273 Angiosperm View MSA
121344219 5274 Embryophyte View MSA
123380005 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain