Gene : Cucsa.027420 C. sativus v1.0
Defline:  (1 of 4) PTHR23076:SF58 - FTSH EXTRACELLULAR PROTEASE FAMILY PROTEIN Genomic Order:  11
Name:  ? Cucsa.027420 Secondary Identifier:  ? PAC:16952118
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.027420 0.5kb upstream 0.5kb upstream 2682 true scaffold00378: 149657-152338 Cucumis sativus
Cucsa.027420 0.5kb upstream 0.5kb upstream 500 false scaffold00378: 149657-150156 Cucumis sativus
Cucsa.027420 0.5kb downstream 0.5kb downstream 2682 true scaffold00378: 150157-152838 Cucumis sativus
Cucsa.027420 0.5kb downstream 0.5kb downstream 500 false scaffold00378: 152339-152838 Cucumis sativus
Cucsa.027420 1.0kb upstream 1.0kb upstream 3182 true scaffold00378: 149157-152338 Cucumis sativus
Cucsa.027420 1.0kb upstream 1.0kb upstream 1000 false scaffold00378: 149157-150156 Cucumis sativus
Cucsa.027420 1.0kb downstream 1.0kb downstream 3182 true scaffold00378: 150157-153338 Cucumis sativus
Cucsa.027420 1.0kb downstream 1.0kb downstream 1000 false scaffold00378: 152339-153338 Cucumis sativus
Cucsa.027420 2.0kb upstream 2.0kb upstream 4182 true scaffold00378: 148157-152338 Cucumis sativus
Cucsa.027420 2.0kb upstream 2.0kb upstream 2000 false scaffold00378: 148157-150156 Cucumis sativus
Cucsa.027420 2.0kb downstream 2.0kb downstream 4182 true scaffold00378: 150157-154338 Cucumis sativus
Cucsa.027420 2.0kb downstream 2.0kb downstream 2000 false scaffold00378: 152339-154338 Cucumis sativus
Cucsa.027420 5.0kb upstream 5.0kb upstream 7182 true scaffold00378: 145157-152338 Cucumis sativus
Cucsa.027420 5.0kb upstream 5.0kb upstream 5000 false scaffold00378: 145157-150156 Cucumis sativus
Cucsa.027420 5.0kb downstream 5.0kb downstream 7182 true scaffold00378: 150157-157338 Cucumis sativus
Cucsa.027420 5.0kb downstream 5.0kb downstream 5000 false scaffold00378: 152339-157338 Cucumis sativus
Cucsa.027420 10.0kb upstream 10.0kb upstream 12182 true scaffold00378: 140157-152338 Cucumis sativus
Cucsa.027420 10.0kb upstream 10.0kb upstream 10000 false scaffold00378: 140157-150156 Cucumis sativus
Cucsa.027420 10.0kb downstream 10.0kb downstream 12182 true scaffold00378: 150157-162338 Cucumis sativus
Cucsa.027420 10.0kb downstream 10.0kb downstream 10000 false scaffold00378: 152339-162338 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122237328 5265 Fabidae View MSA
123983130 5270 Rosid View MSA
123558787 5271 Pentapetalae View MSA
122797927 5272 Eudicot View MSA
122051596 5273 Angiosperm View MSA
123428918 5275 Viridiplantae View MSA
121350518 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain