Protein Family : K13525 - transitional endoplasmic reticulum ATPase (VCP, CDC48) 122797927

Method ID:  5272 Method Name:  Eudicot
Sequence Alignment:  View MSA Member Count:  85

85 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29884.t000006 (1 of 2) K03061 - 26S proteasome regulatory subunit T1 (PSMC2, RPT1) R. communis v0.1 3252   29884: 55655-58906
47442.t000001 (1 of 29) 3.4.25.1 - Proteasome endopeptidase complex / Proteasome R. communis v0.1 736   47442: 85-820
27613.t000020 (1 of 2) PTHR23077//PTHR23077:SF79 - AAA-FAMILY ATPASE // CELL DIVISION CONTROL PROTEIN 48 HOMOLOG A-RELATED R. communis v0.1 1354   27613: 123578-124931
27613.t000019 (1 of 2) PTHR23077//PTHR23077:SF79 - AAA-FAMILY ATPASE // CELL DIVISION CONTROL PROTEIN 48 HOMOLOG A-RELATED R. communis v0.1 228   27613: 123333-123560
Cucsa.027420 (1 of 4) PTHR23076:SF58 - FTSH EXTRACELLULAR PROTEASE FAMILY PROTEIN C. sativus v1.0 2182   scaffold00378: 150157-152338
orange1.1g039253m.g (1 of 5) PTHR23077:SF82 - CELL DIVISION CONTROL PROTEIN 48 HOMOLOG D C. sinensis v1.1 650   scaffold00030: 1013649-1014298
Ciclev10023792m.g (1 of 1) PTHR23077:SF79 - CELL DIVISION CONTROL PROTEIN 48 HOMOLOG A-RELATED C. clementina v1.0 522   scaffold_3: 8196039-8196560
Lus10001402.g (1 of 1) PF02359//PF05496//PF07724 - Cell division protein 48 (CDC48), N-terminal domain (CDC48_N) // Holliday junction DNA helicase ruvB N-terminus (RuvB_N) // AAA domain (Cdc48 subfamily) (AAA_2) L. usitatissimum v1.0 2517   scaffold1851: 80335-82851
Lus10037597.g (1 of 2) 3.6.4.8 - Proteasome ATPase / RP triple-A protein L. usitatissimum v1.0 1488   scaffold196: 683180-684667
Lus10041332.g (1 of 9) PTHR23077:SF82 - CELL DIVISION CONTROL PROTEIN 48 HOMOLOG D L. usitatissimum v1.0 677   scaffold280: 1988576-1989252
Gorai.003G146600 (1 of 1) PTHR23077:SF79 - CELL DIVISION CONTROL PROTEIN 48 HOMOLOG A-RELATED G. raimondii v2.1 1734   Chr03: 41362098-41363831
Thecc1EG045196 (1 of 5) K03061 - 26S proteasome regulatory subunit T1 (PSMC2, RPT1) T. cacao v1.1 584   scaffold_10r: 23030494-23031077
Migut.F01006 (1 of 4) PTHR23074:SF20 - GH08677P M. guttatus v2.0 3329   scaffold_6: 4817767-4821095
Migut.N00715 (1 of 2) 3.6.4.8 - Proteasome ATPase / RP triple-A protein M. guttatus v2.0 822   scaffold_14: 3836567-3837388
Migut.B00207 (1 of 2) PTHR23073//PTHR23073:SF32 - 26S PROTEASE REGULATORY SUBUNIT M. guttatus v2.0 3939   scaffold_2: 881966-885904
Glyma.07G161200 (1 of 4) PTHR23074:SF20 - GH08677P G. max Wm82.a2.v1 1525   Chr07: 20996703-20998227
Glyma.14G162200 (1 of 5) PTHR23076:SF54 - ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 6, CHLOROPLASTIC G. max Wm82.a2.v1 3111   Chr14: 39000829-39003939
Glyma.18G117900 (1 of 5) PTHR23077:SF79 - CELL DIVISION CONTROL PROTEIN 48 HOMOLOG A-RELATED G. max Wm82.a2.v1 897   Chr18: 14563110-14564006
Glyma.19G072700 (1 of 5) PTHR23077:SF79 - CELL DIVISION CONTROL PROTEIN 48 HOMOLOG A-RELATED G. max Wm82.a2.v1 2823   Chr19: 25660955-25663777
Brara.H00697 (1 of 5) PTHR23074:SF20 - GH08677P B. rapa FPsc v1.3 467   A08: 9069443-9069909
Brara.E00609 (1 of 22) PTHR23073 - 26S PROTEASE REGULATORY SUBUNIT B. rapa FPsc v1.3 1013   A05: 3400635-3401647
Bostr.7128s0337 (1 of 1) PTHR23073:SF13 - 26S PROTEASE REGULATORY SUBUNIT 7 B. stricta v1.2 3661   Scaffold7128: 1498912-1502572
SapurV1A.2720s0010 (1 of 6) PTHR23073:SF7 - 26S PROTEASE REGULATORY SUBUNIT 6A S. purpurea v1.0 1829   chr13: 1380885-1382713
SapurV1A.1308s0010 (1 of 1) PTHR23077//PTHR23077:SF83 - AAA-FAMILY ATPASE // SUBFAMILY NOT NAMED S. purpurea v1.0 1595   chr19: 2384791-2386385
Eucgr.J00483 (1 of 2) PTHR23074:SF93 - F10A12.27/F10A12.27 E. grandis v2.0 3142   Chr10: 5220776-5223917
Eucgr.K01260 (1 of 2) PF02359//PF02933//PF07724 - Cell division protein 48 (CDC48), N-terminal domain (CDC48_N) // Cell division protein 48 (CDC48), domain 2 (CDC48_2) // AAA domain (Cdc48 subfamily) (AAA_2) E. grandis v2.0 8305   Chr11: 15992936-16001240
Prupe.6G011000 (1 of 13) PTHR23077 - AAA-FAMILY ATPASE P. persica v2.1 1907   Pp06: 808189-810095
Prupe.5G169800 (1 of 1) PF00004//PF02933//PF07724 - ATPase family associated with various cellular activities (AAA) (AAA) // Cell division protein 48 (CDC48), domain 2 (CDC48_2) // AAA domain (Cdc48 subfamily) (AAA_2) P. persica v2.1 2903   Pp05: 14565020-14567922
Manes.09G067300 (1 of 5) PTHR23077:SF82 - CELL DIVISION CONTROL PROTEIN 48 HOMOLOG D M. esculenta v6.1 4914   Chromosome09: 9139479-9144392
Manes.S096100 (1 of 3) PTHR23073//PTHR23073:SF32 - 26S PROTEASE REGULATORY SUBUNIT M. esculenta v6.1 1797   Scaffold01634: 14403-16199

85 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
47442.m000014 R. communis v0.1 122797927 K13525 - transitional endoplasmic reticulum ATPase (VCP, CDC48) 4 5272 Eudicot
Cucsa.027420.1 C. sativus v1.0 122797927 K13525 - transitional endoplasmic reticulum ATPase (VCP, CDC48) 1 5272 Eudicot
orange1.1g039253m C. sinensis v1.1 122797927 K13525 - transitional endoplasmic reticulum ATPase (VCP, CDC48) 1 5272 Eudicot
Lus10037597 L. usitatissimum v1.0 122797927 K13525 - transitional endoplasmic reticulum ATPase (VCP, CDC48) 3 5272 Eudicot
Migut.N00715.1.p M. guttatus v2.0 122797927 K13525 - transitional endoplasmic reticulum ATPase (VCP, CDC48) 3 5272 Eudicot
Glyma.14G162200.1.p G. max Wm82.a2.v1 122797927 K13525 - transitional endoplasmic reticulum ATPase (VCP, CDC48) 4 5272 Eudicot
Glyma.18G117900.1.p G. max Wm82.a2.v1 122797927 K13525 - transitional endoplasmic reticulum ATPase (VCP, CDC48) 4 5272 Eudicot
Bostr.7128s0337.1.p B. stricta v1.2 122797927 K13525 - transitional endoplasmic reticulum ATPase (VCP, CDC48) 1 5272 Eudicot
Eucgr.J00483.1.p E. grandis v2.0 122797927 K13525 - transitional endoplasmic reticulum ATPase (VCP, CDC48) 2 5272 Eudicot
Eucgr.K01260.1.p E. grandis v2.0 122797927 K13525 - transitional endoplasmic reticulum ATPase (VCP, CDC48) 2 5272 Eudicot
Prupe.6G011000.1.p P. persica v2.1 122797927 K13525 - transitional endoplasmic reticulum ATPase (VCP, CDC48) 2 5272 Eudicot
Prupe.5G169800.1.p P. persica v2.1 122797927 K13525 - transitional endoplasmic reticulum ATPase (VCP, CDC48) 2 5272 Eudicot
Manes.09G067300.1.p M. esculenta v6.1 122797927 K13525 - transitional endoplasmic reticulum ATPase (VCP, CDC48) 2 5272 Eudicot
Aqcoe7G099300.1.p A. coerulea v3.1 122797927 K13525 - transitional endoplasmic reticulum ATPase (VCP, CDC48) 5 5272 Eudicot
Aqcoe1G107700.1.p A. coerulea v3.1 122797927 K13525 - transitional endoplasmic reticulum ATPase (VCP, CDC48) 5 5272 Eudicot
Aqcoe1G243300.1.p A. coerulea v3.1 122797927 K13525 - transitional endoplasmic reticulum ATPase (VCP, CDC48) 5 5272 Eudicot
Aqcoe0840s0001.1.p A. coerulea v3.1 122797927 K13525 - transitional endoplasmic reticulum ATPase (VCP, CDC48) 5 5272 Eudicot
Aqcoe3G157900.1.p A. coerulea v3.1 122797927 K13525 - transitional endoplasmic reticulum ATPase (VCP, CDC48) 5 5272 Eudicot
AL1G29510.t1 A. lyrata v2.1 122797927 K13525 - transitional endoplasmic reticulum ATPase (VCP, CDC48) 1 5272 Eudicot
Solyc02g036330.2.1 S. lycopersicum ITAG2.4 122797927 K13525 - transitional endoplasmic reticulum ATPase (VCP, CDC48) 2 5272 Eudicot
AUR62018072-RA C. quinoa v1.0 122797927 K13525 - transitional endoplasmic reticulum ATPase (VCP, CDC48) 8 5272 Eudicot
AUR62028753-RA C. quinoa v1.0 122797927 K13525 - transitional endoplasmic reticulum ATPase (VCP, CDC48) 8 5272 Eudicot
AUR62002924-RA C. quinoa v1.0 122797927 K13525 - transitional endoplasmic reticulum ATPase (VCP, CDC48) 8 5272 Eudicot
AUR62001388-RA C. quinoa v1.0 122797927 K13525 - transitional endoplasmic reticulum ATPase (VCP, CDC48) 8 5272 Eudicot
Podel.02G240200.1.p P. deltoides WV94 v2.1 122797927 K13525 - transitional endoplasmic reticulum ATPase (VCP, CDC48) 5 5272 Eudicot
Podel.02G033600.1.p P. deltoides WV94 v2.1 122797927 K13525 - transitional endoplasmic reticulum ATPase (VCP, CDC48) 5 5272 Eudicot
Podel.05G026400.1.p P. deltoides WV94 v2.1 122797927 K13525 - transitional endoplasmic reticulum ATPase (VCP, CDC48) 5 5272 Eudicot
Podel.13G017000.1.p P. deltoides WV94 v2.1 122797927 K13525 - transitional endoplasmic reticulum ATPase (VCP, CDC48) 5 5272 Eudicot
PGSC0003DMP400000053 S. tuberosum v4.03 122797927 K13525 - transitional endoplasmic reticulum ATPase (VCP, CDC48) 2 5272 Eudicot
PGSC0003DMP400032716 S. tuberosum v4.03 122797927 K13525 - transitional endoplasmic reticulum ATPase (VCP, CDC48) 2 5272 Eudicot