Gene : Glyma.14G162200 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR23076:SF54 - ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 6, CHLOROPLASTIC Genomic Order:  1622
Name:  ? Glyma.14G162200 Secondary Identifier:  ? PAC:30535159
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.14G162200 0.5kb upstream 0.5kb upstream 3611 true Chr14: 39000329-39003939 Glycine max
Glyma.14G162200 0.5kb upstream 0.5kb upstream 500 false Chr14: 39000329-39000828 Glycine max
Glyma.14G162200 0.5kb downstream 0.5kb downstream 3611 true Chr14: 39000829-39004439 Glycine max
Glyma.14G162200 0.5kb downstream 0.5kb downstream 500 false Chr14: 39003940-39004439 Glycine max
Glyma.14G162200 1.0kb upstream 1.0kb upstream 4111 true Chr14: 38999829-39003939 Glycine max
Glyma.14G162200 1.0kb upstream 1.0kb upstream 1000 false Chr14: 38999829-39000828 Glycine max
Glyma.14G162200 1.0kb downstream 1.0kb downstream 4111 true Chr14: 39000829-39004939 Glycine max
Glyma.14G162200 1.0kb downstream 1.0kb downstream 1000 false Chr14: 39003940-39004939 Glycine max
Glyma.14G162200 2.0kb upstream 2.0kb upstream 5111 true Chr14: 38998829-39003939 Glycine max
Glyma.14G162200 2.0kb upstream 2.0kb upstream 2000 false Chr14: 38998829-39000828 Glycine max
Glyma.14G162200 2.0kb downstream 2.0kb downstream 5111 true Chr14: 39000829-39005939 Glycine max
Glyma.14G162200 2.0kb downstream 2.0kb downstream 2000 false Chr14: 39003940-39005939 Glycine max
Glyma.14G162200 5.0kb upstream 5.0kb upstream 8111 true Chr14: 38995829-39003939 Glycine max
Glyma.14G162200 5.0kb upstream 5.0kb upstream 5000 false Chr14: 38995829-39000828 Glycine max
Glyma.14G162200 5.0kb downstream 5.0kb downstream 8111 true Chr14: 39000829-39008939 Glycine max
Glyma.14G162200 5.0kb downstream 5.0kb downstream 5000 false Chr14: 39003940-39008939 Glycine max
Glyma.14G162200 10.0kb upstream 10.0kb upstream 13111 true Chr14: 38990829-39003939 Glycine max
Glyma.14G162200 10.0kb upstream 10.0kb upstream 10000 false Chr14: 38990829-39000828 Glycine max
Glyma.14G162200 10.0kb downstream 10.0kb downstream 13111 true Chr14: 39000829-39013939 Glycine max
Glyma.14G162200 10.0kb downstream 10.0kb downstream 10000 false Chr14: 39003940-39013939 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122240620 5265 Fabidae Singleton cluster - no MSA
124039814 5270 Rosid View MSA
123753569 5271 Pentapetalae View MSA
122797927 5272 Eudicot View MSA
122051596 5273 Angiosperm View MSA
123428918 5275 Viridiplantae View MSA
121350518 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0336233 0.0 0.150876 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain