Gene : Thecc1EG045196 T. cacao v1.1
Defline:  (1 of 5) K03061 - 26S proteasome regulatory subunit T1 (PSMC2, RPT1) Genomic Order:  1571
Name:  ? Thecc1EG045196 Secondary Identifier:  ? PAC:27442702
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG045196 0.5kb upstream 0.5kb upstream 1084 true scaffold_10r: 23029994-23031077 Theobroma cacao
Thecc1EG045196 0.5kb upstream 0.5kb upstream 500 false scaffold_10r: 23029994-23030493 Theobroma cacao
Thecc1EG045196 0.5kb downstream 0.5kb downstream 1084 true scaffold_10r: 23030494-23031577 Theobroma cacao
Thecc1EG045196 0.5kb downstream 0.5kb downstream 500 false scaffold_10r: 23031078-23031577 Theobroma cacao
Thecc1EG045196 1.0kb upstream 1.0kb upstream 1584 true scaffold_10r: 23029494-23031077 Theobroma cacao
Thecc1EG045196 1.0kb upstream 1.0kb upstream 1000 false scaffold_10r: 23029494-23030493 Theobroma cacao
Thecc1EG045196 1.0kb downstream 1.0kb downstream 1584 true scaffold_10r: 23030494-23032077 Theobroma cacao
Thecc1EG045196 1.0kb downstream 1.0kb downstream 1000 false scaffold_10r: 23031078-23032077 Theobroma cacao
Thecc1EG045196 2.0kb upstream 2.0kb upstream 2584 true scaffold_10r: 23028494-23031077 Theobroma cacao
Thecc1EG045196 2.0kb upstream 2.0kb upstream 2000 false scaffold_10r: 23028494-23030493 Theobroma cacao
Thecc1EG045196 2.0kb downstream 2.0kb downstream 2584 true scaffold_10r: 23030494-23033077 Theobroma cacao
Thecc1EG045196 2.0kb downstream 2.0kb downstream 2000 false scaffold_10r: 23031078-23033077 Theobroma cacao
Thecc1EG045196 5.0kb upstream 5.0kb upstream 5584 true scaffold_10r: 23025494-23031077 Theobroma cacao
Thecc1EG045196 5.0kb upstream 5.0kb upstream 5000 false scaffold_10r: 23025494-23030493 Theobroma cacao
Thecc1EG045196 5.0kb downstream 5.0kb downstream 5584 true scaffold_10r: 23030494-23036077 Theobroma cacao
Thecc1EG045196 5.0kb downstream 5.0kb downstream 5000 false scaffold_10r: 23031078-23036077 Theobroma cacao
Thecc1EG045196 10.0kb upstream 10.0kb upstream 10584 true scaffold_10r: 23020494-23031077 Theobroma cacao
Thecc1EG045196 10.0kb upstream 10.0kb upstream 10000 false scaffold_10r: 23020494-23030493 Theobroma cacao
Thecc1EG045196 10.0kb downstream 10.0kb downstream 10584 true scaffold_10r: 23030494-23041077 Theobroma cacao
Thecc1EG045196 10.0kb downstream 10.0kb downstream 10000 false scaffold_10r: 23031078-23041077 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123816528 5264 Brassicales-Malvales Singleton cluster - no MSA
124312924 5266 SBM Singleton cluster - no MSA
124249389 5268 Malvidae View MSA
124073226 5270 Rosid View MSA
123753569 5271 Pentapetalae View MSA
122797927 5272 Eudicot View MSA
122051596 5273 Angiosperm View MSA
123428918 5275 Viridiplantae View MSA
121350518 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain