Gene : Glyma.18G117900 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR23077:SF79 - CELL DIVISION CONTROL PROTEIN 48 HOMOLOG A-RELATED Genomic Order:  1179
Name:  ? Glyma.18G117900 Secondary Identifier:  ? PAC:30555883
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G117900 0.5kb upstream 0.5kb upstream 1397 true Chr18: 14563110-14564506 Glycine max
Glyma.18G117900 0.5kb upstream 0.5kb upstream 500 false Chr18: 14564007-14564506 Glycine max
Glyma.18G117900 0.5kb downstream 0.5kb downstream 1397 true Chr18: 14562610-14564006 Glycine max
Glyma.18G117900 0.5kb downstream 0.5kb downstream 500 false Chr18: 14562610-14563109 Glycine max
Glyma.18G117900 1.0kb upstream 1.0kb upstream 1897 true Chr18: 14563110-14565006 Glycine max
Glyma.18G117900 1.0kb upstream 1.0kb upstream 1000 false Chr18: 14564007-14565006 Glycine max
Glyma.18G117900 1.0kb downstream 1.0kb downstream 1897 true Chr18: 14562110-14564006 Glycine max
Glyma.18G117900 1.0kb downstream 1.0kb downstream 1000 false Chr18: 14562110-14563109 Glycine max
Glyma.18G117900 2.0kb upstream 2.0kb upstream 2897 true Chr18: 14563110-14566006 Glycine max
Glyma.18G117900 2.0kb upstream 2.0kb upstream 2000 false Chr18: 14564007-14566006 Glycine max
Glyma.18G117900 2.0kb downstream 2.0kb downstream 2897 true Chr18: 14561110-14564006 Glycine max
Glyma.18G117900 2.0kb downstream 2.0kb downstream 2000 false Chr18: 14561110-14563109 Glycine max
Glyma.18G117900 5.0kb upstream 5.0kb upstream 5897 true Chr18: 14563110-14569006 Glycine max
Glyma.18G117900 5.0kb upstream 5.0kb upstream 5000 false Chr18: 14564007-14569006 Glycine max
Glyma.18G117900 5.0kb downstream 5.0kb downstream 5897 true Chr18: 14558110-14564006 Glycine max
Glyma.18G117900 5.0kb downstream 5.0kb downstream 5000 false Chr18: 14558110-14563109 Glycine max
Glyma.18G117900 10.0kb upstream 10.0kb upstream 10897 true Chr18: 14563110-14574006 Glycine max
Glyma.18G117900 10.0kb upstream 10.0kb upstream 10000 false Chr18: 14564007-14574006 Glycine max
Glyma.18G117900 10.0kb downstream 10.0kb downstream 10897 true Chr18: 14553110-14564006 Glycine max
Glyma.18G117900 10.0kb downstream 10.0kb downstream 10000 false Chr18: 14553110-14563109 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122250106 5265 Fabidae View MSA
123993415 5270 Rosid View MSA
123753569 5271 Pentapetalae View MSA
122797927 5272 Eudicot View MSA
122051596 5273 Angiosperm View MSA
123428918 5275 Viridiplantae View MSA
121350518 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0245757 0.0 0.118161 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0854382 0.0 0.366147 Low  
cufflinks 0.0396318 0.0 0.181522 Low  
cufflinks 2.75781E-4 0.0 0.0071086 Low Low
cufflinks 4.71627E-4 0.0 0.00945316 Low  
cufflinks 0.033     Low  
cufflinks 0.022     Low Low
cufflinks 0.09     Low High
cufflinks 0.173       High
cufflinks 0.02     Low Low
cufflinks 0.023     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.049     Low  
cufflinks 0.11     Low High
cufflinks 0.046     Low  
cufflinks 0.059     Low  
cufflinks 0.058     Low  
cufflinks 0.025     Low  
cufflinks 0.097     Low High
cufflinks 0.022     Low Low
cufflinks 0.038     Low  
cufflinks 0.035     Low  

0 Strain