Gene : Cucsa.032140 C. sativus v1.0
Defline:  (1 of 3) PTHR10315:SF34 - E3 UBIQUITIN-PROTEIN LIGASE SINAT3-RELATED Genomic Order:  94
Name:  ? Cucsa.032140 Secondary Identifier:  ? PAC:16952405
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-7511 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.032140 0.5kb upstream 0.5kb upstream 3680 true scaffold00429: 1550858-1554537 Cucumis sativus
Cucsa.032140 0.5kb upstream 0.5kb upstream 500 false scaffold00429: 1554038-1554537 Cucumis sativus
Cucsa.032140 0.5kb downstream 0.5kb downstream 3680 true scaffold00429: 1550358-1554037 Cucumis sativus
Cucsa.032140 0.5kb downstream 0.5kb downstream 500 false scaffold00429: 1550358-1550857 Cucumis sativus
Cucsa.032140 1.0kb upstream 1.0kb upstream 4180 true scaffold00429: 1550858-1555037 Cucumis sativus
Cucsa.032140 1.0kb upstream 1.0kb upstream 1000 false scaffold00429: 1554038-1555037 Cucumis sativus
Cucsa.032140 1.0kb downstream 1.0kb downstream 4180 true scaffold00429: 1549858-1554037 Cucumis sativus
Cucsa.032140 1.0kb downstream 1.0kb downstream 1000 false scaffold00429: 1549858-1550857 Cucumis sativus
Cucsa.032140 2.0kb upstream 2.0kb upstream 5180 true scaffold00429: 1550858-1556037 Cucumis sativus
Cucsa.032140 2.0kb upstream 2.0kb upstream 2000 false scaffold00429: 1554038-1556037 Cucumis sativus
Cucsa.032140 2.0kb downstream 2.0kb downstream 5180 true scaffold00429: 1548858-1554037 Cucumis sativus
Cucsa.032140 2.0kb downstream 2.0kb downstream 2000 false scaffold00429: 1548858-1550857 Cucumis sativus
Cucsa.032140 5.0kb upstream 5.0kb upstream 8180 true scaffold00429: 1550858-1559037 Cucumis sativus
Cucsa.032140 5.0kb upstream 5.0kb upstream 5000 false scaffold00429: 1554038-1559037 Cucumis sativus
Cucsa.032140 5.0kb downstream 5.0kb downstream 8180 true scaffold00429: 1545858-1554037 Cucumis sativus
Cucsa.032140 5.0kb downstream 5.0kb downstream 5000 false scaffold00429: 1545858-1550857 Cucumis sativus
Cucsa.032140 10.0kb upstream 10.0kb upstream 13180 true scaffold00429: 1550858-1564037 Cucumis sativus
Cucsa.032140 10.0kb upstream 10.0kb upstream 10000 false scaffold00429: 1554038-1564037 Cucumis sativus
Cucsa.032140 10.0kb downstream 10.0kb downstream 13180 true scaffold00429: 1540858-1554037 Cucumis sativus
Cucsa.032140 10.0kb downstream 10.0kb downstream 10000 false scaffold00429: 1540858-1550857 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310137 5265 Fabidae View MSA
124072834 5270 Rosid View MSA
123746623 5271 Pentapetalae View MSA
122796827 5272 Eudicot View MSA
122050638 5273 Angiosperm View MSA
121350928 5274 Embryophyte View MSA
123381939 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain