Gene : Cucsa.034470 C. sativus v1.0
Defline:  (1 of 3) PTHR14363//PTHR14363:SF13 - HEPARANASE-RELATED Genomic Order:  11
Name:  ? Cucsa.034470 Secondary Identifier:  ? PAC:16952602
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-7213 Cucumis sativus pathologic  
Csativus PWY-7214 Cucumis sativus pathologic  
Csativus PWY-7445 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.034470 0.5kb upstream 0.5kb upstream 3362 true scaffold00444: 220355-223716 Cucumis sativus
Cucsa.034470 0.5kb upstream 0.5kb upstream 500 false scaffold00444: 223217-223716 Cucumis sativus
Cucsa.034470 0.5kb downstream 0.5kb downstream 3362 true scaffold00444: 219855-223216 Cucumis sativus
Cucsa.034470 0.5kb downstream 0.5kb downstream 500 false scaffold00444: 219855-220354 Cucumis sativus
Cucsa.034470 1.0kb upstream 1.0kb upstream 3862 true scaffold00444: 220355-224216 Cucumis sativus
Cucsa.034470 1.0kb upstream 1.0kb upstream 1000 false scaffold00444: 223217-224216 Cucumis sativus
Cucsa.034470 1.0kb downstream 1.0kb downstream 3862 true scaffold00444: 219355-223216 Cucumis sativus
Cucsa.034470 1.0kb downstream 1.0kb downstream 1000 false scaffold00444: 219355-220354 Cucumis sativus
Cucsa.034470 2.0kb upstream 2.0kb upstream 4862 true scaffold00444: 220355-225216 Cucumis sativus
Cucsa.034470 2.0kb upstream 2.0kb upstream 2000 false scaffold00444: 223217-225216 Cucumis sativus
Cucsa.034470 2.0kb downstream 2.0kb downstream 4862 true scaffold00444: 218355-223216 Cucumis sativus
Cucsa.034470 2.0kb downstream 2.0kb downstream 2000 false scaffold00444: 218355-220354 Cucumis sativus
Cucsa.034470 5.0kb upstream 5.0kb upstream 7862 true scaffold00444: 220355-228216 Cucumis sativus
Cucsa.034470 5.0kb upstream 5.0kb upstream 5000 false scaffold00444: 223217-228216 Cucumis sativus
Cucsa.034470 5.0kb downstream 5.0kb downstream 7862 true scaffold00444: 215355-223216 Cucumis sativus
Cucsa.034470 5.0kb downstream 5.0kb downstream 5000 false scaffold00444: 215355-220354 Cucumis sativus
Cucsa.034470 10.0kb upstream 10.0kb upstream 12862 true scaffold00444: 220355-233216 Cucumis sativus
Cucsa.034470 10.0kb upstream 10.0kb upstream 10000 false scaffold00444: 223217-233216 Cucumis sativus
Cucsa.034470 10.0kb downstream 10.0kb downstream 12862 true scaffold00444: 210355-223216 Cucumis sativus
Cucsa.034470 10.0kb downstream 10.0kb downstream 10000 false scaffold00444: 210355-220354 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121606495 5273 Angiosperm View MSA
122236765 5265 Fabidae View MSA
123982975 5270 Rosid View MSA
123558649 5271 Pentapetalae View MSA
122593463 5272 Eudicot View MSA
120878785 5274 Embryophyte View MSA
122919674 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain