Gene : Cucsa.049880 C. sativus v1.0
Defline:  (1 of 5) PF06075 - Plant protein of unknown function (DUF936) (DUF936) Genomic Order:  6
Name:  ? Cucsa.049880 Secondary Identifier:  ? PAC:16954019
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.049880 0.5kb upstream 0.5kb upstream 3095 true scaffold00551: 50522-53616 Cucumis sativus
Cucsa.049880 0.5kb upstream 0.5kb upstream 500 false scaffold00551: 53117-53616 Cucumis sativus
Cucsa.049880 0.5kb downstream 0.5kb downstream 3095 true scaffold00551: 50022-53116 Cucumis sativus
Cucsa.049880 0.5kb downstream 0.5kb downstream 500 false scaffold00551: 50022-50521 Cucumis sativus
Cucsa.049880 1.0kb upstream 1.0kb upstream 3595 true scaffold00551: 50522-54116 Cucumis sativus
Cucsa.049880 1.0kb upstream 1.0kb upstream 1000 false scaffold00551: 53117-54116 Cucumis sativus
Cucsa.049880 1.0kb downstream 1.0kb downstream 3595 true scaffold00551: 49522-53116 Cucumis sativus
Cucsa.049880 1.0kb downstream 1.0kb downstream 1000 false scaffold00551: 49522-50521 Cucumis sativus
Cucsa.049880 2.0kb upstream 2.0kb upstream 4595 true scaffold00551: 50522-55116 Cucumis sativus
Cucsa.049880 2.0kb upstream 2.0kb upstream 2000 false scaffold00551: 53117-55116 Cucumis sativus
Cucsa.049880 2.0kb downstream 2.0kb downstream 4595 true scaffold00551: 48522-53116 Cucumis sativus
Cucsa.049880 2.0kb downstream 2.0kb downstream 2000 false scaffold00551: 48522-50521 Cucumis sativus
Cucsa.049880 5.0kb upstream 5.0kb upstream 7595 true scaffold00551: 50522-58116 Cucumis sativus
Cucsa.049880 5.0kb upstream 5.0kb upstream 5000 false scaffold00551: 53117-58116 Cucumis sativus
Cucsa.049880 5.0kb downstream 5.0kb downstream 7595 true scaffold00551: 45522-53116 Cucumis sativus
Cucsa.049880 5.0kb downstream 5.0kb downstream 5000 false scaffold00551: 45522-50521 Cucumis sativus
Cucsa.049880 10.0kb upstream 10.0kb upstream 12595 true scaffold00551: 50522-63116 Cucumis sativus
Cucsa.049880 10.0kb upstream 10.0kb upstream 10000 false scaffold00551: 53117-63116 Cucumis sativus
Cucsa.049880 10.0kb downstream 10.0kb downstream 12595 true scaffold00551: 40522-53116 Cucumis sativus
Cucsa.049880 10.0kb downstream 10.0kb downstream 10000 false scaffold00551: 40522-50521 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121601978 5273 Angiosperm Singleton cluster - no MSA
122232211 5265 Fabidae Singleton cluster - no MSA
123978452 5270 Rosid Singleton cluster - no MSA
123554130 5271 Pentapetalae Singleton cluster - no MSA
122588944 5272 Eudicot Singleton cluster - no MSA
120874269 5274 Embryophyte Singleton cluster - no MSA
122915160 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain