Gene : Cucsa.058540 C. sativus v1.0

Defline:  (1 of 1) PTHR12303:SF6 - UPF0586 PROTEIN C9ORF41 Genomic Order:  96
Name:  ? Cucsa.058540 Secondary Identifier:  ? PAC:16954692

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.058540 0.5kb upstream 0.5kb upstream 14421 true scaffold00614: 686830-701250 Cucumis sativus
Cucsa.058540 0.5kb upstream 0.5kb upstream 500 false scaffold00614: 700751-701250 Cucumis sativus
Cucsa.058540 0.5kb downstream 0.5kb downstream 14421 true scaffold00614: 686330-700750 Cucumis sativus
Cucsa.058540 0.5kb downstream 0.5kb downstream 500 false scaffold00614: 686330-686829 Cucumis sativus
Cucsa.058540 1.0kb upstream 1.0kb upstream 14921 true scaffold00614: 686830-701750 Cucumis sativus
Cucsa.058540 1.0kb upstream 1.0kb upstream 1000 false scaffold00614: 700751-701750 Cucumis sativus
Cucsa.058540 1.0kb downstream 1.0kb downstream 14921 true scaffold00614: 685830-700750 Cucumis sativus
Cucsa.058540 1.0kb downstream 1.0kb downstream 1000 false scaffold00614: 685830-686829 Cucumis sativus
Cucsa.058540 2.0kb upstream 2.0kb upstream 15921 true scaffold00614: 686830-702750 Cucumis sativus
Cucsa.058540 2.0kb upstream 2.0kb upstream 2000 false scaffold00614: 700751-702750 Cucumis sativus
Cucsa.058540 2.0kb downstream 2.0kb downstream 15921 true scaffold00614: 684830-700750 Cucumis sativus
Cucsa.058540 2.0kb downstream 2.0kb downstream 2000 false scaffold00614: 684830-686829 Cucumis sativus
Cucsa.058540 5.0kb upstream 5.0kb upstream 18921 true scaffold00614: 686830-705750 Cucumis sativus
Cucsa.058540 5.0kb upstream 5.0kb upstream 5000 false scaffold00614: 700751-705750 Cucumis sativus
Cucsa.058540 5.0kb downstream 5.0kb downstream 18921 true scaffold00614: 681830-700750 Cucumis sativus
Cucsa.058540 5.0kb downstream 5.0kb downstream 5000 false scaffold00614: 681830-686829 Cucumis sativus
Cucsa.058540 10.0kb upstream 10.0kb upstream 23921 true scaffold00614: 686830-710750 Cucumis sativus
Cucsa.058540 10.0kb upstream 10.0kb upstream 10000 false scaffold00614: 700751-710750 Cucumis sativus
Cucsa.058540 10.0kb downstream 10.0kb downstream 23921 true scaffold00614: 676830-700750 Cucumis sativus
Cucsa.058540 10.0kb downstream 10.0kb downstream 10000 false scaffold00614: 676830-686829 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304958 5265 Fabidae View MSA
124060622 5270 Rosid View MSA
123739878 5271 Pentapetalae View MSA
122791925 5272 Eudicot View MSA
122046455 5273 Angiosperm View MSA
121344322 5274 Embryophyte View MSA
123425361 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain