Gene : Cucsa.058520 C. sativus v1.0
Defline:  (1 of 1) PTHR10388:SF5 - APO PROTEIN 1, CHLOROPLASTIC Genomic Order:  94
Name:  ? Cucsa.058520 Secondary Identifier:  ? PAC:16954690
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.058520 0.5kb upstream 0.5kb upstream 3436 true scaffold00614: 674983-678418 Cucumis sativus
Cucsa.058520 0.5kb upstream 0.5kb upstream 500 false scaffold00614: 674983-675482 Cucumis sativus
Cucsa.058520 0.5kb downstream 0.5kb downstream 3436 true scaffold00614: 675483-678918 Cucumis sativus
Cucsa.058520 0.5kb downstream 0.5kb downstream 500 false scaffold00614: 678419-678918 Cucumis sativus
Cucsa.058520 1.0kb upstream 1.0kb upstream 3936 true scaffold00614: 674483-678418 Cucumis sativus
Cucsa.058520 1.0kb upstream 1.0kb upstream 1000 false scaffold00614: 674483-675482 Cucumis sativus
Cucsa.058520 1.0kb downstream 1.0kb downstream 3936 true scaffold00614: 675483-679418 Cucumis sativus
Cucsa.058520 1.0kb downstream 1.0kb downstream 1000 false scaffold00614: 678419-679418 Cucumis sativus
Cucsa.058520 2.0kb upstream 2.0kb upstream 4936 true scaffold00614: 673483-678418 Cucumis sativus
Cucsa.058520 2.0kb upstream 2.0kb upstream 2000 false scaffold00614: 673483-675482 Cucumis sativus
Cucsa.058520 2.0kb downstream 2.0kb downstream 4936 true scaffold00614: 675483-680418 Cucumis sativus
Cucsa.058520 2.0kb downstream 2.0kb downstream 2000 false scaffold00614: 678419-680418 Cucumis sativus
Cucsa.058520 5.0kb upstream 5.0kb upstream 7936 true scaffold00614: 670483-678418 Cucumis sativus
Cucsa.058520 5.0kb upstream 5.0kb upstream 5000 false scaffold00614: 670483-675482 Cucumis sativus
Cucsa.058520 5.0kb downstream 5.0kb downstream 7936 true scaffold00614: 675483-683418 Cucumis sativus
Cucsa.058520 5.0kb downstream 5.0kb downstream 5000 false scaffold00614: 678419-683418 Cucumis sativus
Cucsa.058520 10.0kb upstream 10.0kb upstream 12936 true scaffold00614: 665483-678418 Cucumis sativus
Cucsa.058520 10.0kb upstream 10.0kb upstream 10000 false scaffold00614: 665483-675482 Cucumis sativus
Cucsa.058520 10.0kb downstream 10.0kb downstream 12936 true scaffold00614: 675483-688418 Cucumis sativus
Cucsa.058520 10.0kb downstream 10.0kb downstream 10000 false scaffold00614: 678419-688418 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302353 5265 Fabidae View MSA
124064278 5270 Rosid View MSA
123740301 5271 Pentapetalae View MSA
122796773 5272 Eudicot View MSA
122049690 5273 Angiosperm View MSA
121348110 5274 Embryophyte View MSA
123380728 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain