Gene : Cre01.g015550 C. reinhardtii v5.6
Defline:  (1 of 1) 4.1.2.52 - 4-hydroxy-2-oxoheptanedioate aldolase / HKHD aldolase Genomic Order:  356
Name:  ? Cre01.g015550 Secondary Identifier:  ? PAC:30788865
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre01.g015550 0.5kb upstream 0.5kb upstream 3322 true chromosome_1: 2649430-2652751 Chlamydomonas reinhardtii
Cre01.g015550 0.5kb upstream 0.5kb upstream 500 false chromosome_1: 2649430-2649929 Chlamydomonas reinhardtii
Cre01.g015550 0.5kb downstream 0.5kb downstream 3322 true chromosome_1: 2649930-2653251 Chlamydomonas reinhardtii
Cre01.g015550 0.5kb downstream 0.5kb downstream 500 false chromosome_1: 2652752-2653251 Chlamydomonas reinhardtii
Cre01.g015550 1.0kb upstream 1.0kb upstream 3822 true chromosome_1: 2648930-2652751 Chlamydomonas reinhardtii
Cre01.g015550 1.0kb upstream 1.0kb upstream 1000 false chromosome_1: 2648930-2649929 Chlamydomonas reinhardtii
Cre01.g015550 1.0kb downstream 1.0kb downstream 3822 true chromosome_1: 2649930-2653751 Chlamydomonas reinhardtii
Cre01.g015550 1.0kb downstream 1.0kb downstream 1000 false chromosome_1: 2652752-2653751 Chlamydomonas reinhardtii
Cre01.g015550 2.0kb upstream 2.0kb upstream 4822 true chromosome_1: 2647930-2652751 Chlamydomonas reinhardtii
Cre01.g015550 2.0kb upstream 2.0kb upstream 2000 false chromosome_1: 2647930-2649929 Chlamydomonas reinhardtii
Cre01.g015550 2.0kb downstream 2.0kb downstream 4822 true chromosome_1: 2649930-2654751 Chlamydomonas reinhardtii
Cre01.g015550 2.0kb downstream 2.0kb downstream 2000 false chromosome_1: 2652752-2654751 Chlamydomonas reinhardtii
Cre01.g015550 5.0kb upstream 5.0kb upstream 7822 true chromosome_1: 2644930-2652751 Chlamydomonas reinhardtii
Cre01.g015550 5.0kb upstream 5.0kb upstream 5000 false chromosome_1: 2644930-2649929 Chlamydomonas reinhardtii
Cre01.g015550 5.0kb downstream 5.0kb downstream 7822 true chromosome_1: 2649930-2657751 Chlamydomonas reinhardtii
Cre01.g015550 5.0kb downstream 5.0kb downstream 5000 false chromosome_1: 2652752-2657751 Chlamydomonas reinhardtii
Cre01.g015550 10.0kb upstream 10.0kb upstream 12822 true chromosome_1: 2639930-2652751 Chlamydomonas reinhardtii
Cre01.g015550 10.0kb upstream 10.0kb upstream 10000 false chromosome_1: 2639930-2649929 Chlamydomonas reinhardtii
Cre01.g015550 10.0kb downstream 10.0kb downstream 12822 true chromosome_1: 2649930-2662751 Chlamydomonas reinhardtii
Cre01.g015550 10.0kb downstream 10.0kb downstream 10000 false chromosome_1: 2652752-2662751 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124080333 5260 Chlorophyte Singleton cluster - no MSA
123426145 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.517        
cufflinks 1.328        
cufflinks 1.546        
cufflinks 2.077        
cufflinks 1.392        
cufflinks 1.502        
cufflinks 0.867       Low
cufflinks 2.202        
cufflinks 1.784        
cufflinks 2.395       High
cufflinks 1.139        
cufflinks 1.305        
cufflinks 3.273       High
cufflinks 2.221        
cufflinks 0.948       Low
cufflinks 2.414       High
cufflinks 2.01        
cufflinks 1.72        
cufflinks 0.379       Low
cufflinks 1.324        
cufflinks 1.018        
cufflinks 1.36        
cufflinks 2.591       High
cufflinks 1.946        
cufflinks 1.219        
cufflinks 3.96616 0.357579 7.57475   Low
cufflinks 6.33592 0.773877 11.898    
cufflinks 4.4172 0.0 9.91414    
cufflinks 2.38401 0.0561066 4.71192   Low
cufflinks 6.80909 0.852806 12.7654   High

0 Strain