Gene : Cre01.g017500 C. reinhardtii v5.6
Defline:  (1 of 1) K14574 - ribosome maturation protein SDO1 (SDO1, SBDS) Genomic Order:  396
Name:  ? Cre01.g017500 Secondary Identifier:  ? PAC:30788622
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre01.g017500 0.5kb upstream 0.5kb upstream 4342 true chromosome_1: 2878503-2882844 Chlamydomonas reinhardtii
Cre01.g017500 0.5kb upstream 0.5kb upstream 500 false chromosome_1: 2878503-2879002 Chlamydomonas reinhardtii
Cre01.g017500 0.5kb downstream 0.5kb downstream 4342 true chromosome_1: 2879003-2883344 Chlamydomonas reinhardtii
Cre01.g017500 0.5kb downstream 0.5kb downstream 500 false chromosome_1: 2882845-2883344 Chlamydomonas reinhardtii
Cre01.g017500 1.0kb upstream 1.0kb upstream 4842 true chromosome_1: 2878003-2882844 Chlamydomonas reinhardtii
Cre01.g017500 1.0kb upstream 1.0kb upstream 1000 false chromosome_1: 2878003-2879002 Chlamydomonas reinhardtii
Cre01.g017500 1.0kb downstream 1.0kb downstream 4842 true chromosome_1: 2879003-2883844 Chlamydomonas reinhardtii
Cre01.g017500 1.0kb downstream 1.0kb downstream 1000 false chromosome_1: 2882845-2883844 Chlamydomonas reinhardtii
Cre01.g017500 2.0kb upstream 2.0kb upstream 5842 true chromosome_1: 2877003-2882844 Chlamydomonas reinhardtii
Cre01.g017500 2.0kb upstream 2.0kb upstream 2000 false chromosome_1: 2877003-2879002 Chlamydomonas reinhardtii
Cre01.g017500 2.0kb downstream 2.0kb downstream 5842 true chromosome_1: 2879003-2884844 Chlamydomonas reinhardtii
Cre01.g017500 2.0kb downstream 2.0kb downstream 2000 false chromosome_1: 2882845-2884844 Chlamydomonas reinhardtii
Cre01.g017500 5.0kb upstream 5.0kb upstream 8842 true chromosome_1: 2874003-2882844 Chlamydomonas reinhardtii
Cre01.g017500 5.0kb upstream 5.0kb upstream 5000 false chromosome_1: 2874003-2879002 Chlamydomonas reinhardtii
Cre01.g017500 5.0kb downstream 5.0kb downstream 8842 true chromosome_1: 2879003-2887844 Chlamydomonas reinhardtii
Cre01.g017500 5.0kb downstream 5.0kb downstream 5000 false chromosome_1: 2882845-2887844 Chlamydomonas reinhardtii
Cre01.g017500 10.0kb upstream 10.0kb upstream 13842 true chromosome_1: 2869003-2882844 Chlamydomonas reinhardtii
Cre01.g017500 10.0kb upstream 10.0kb upstream 10000 false chromosome_1: 2869003-2879002 Chlamydomonas reinhardtii
Cre01.g017500 10.0kb downstream 10.0kb downstream 13842 true chromosome_1: 2879003-2892844 Chlamydomonas reinhardtii
Cre01.g017500 10.0kb downstream 10.0kb downstream 10000 false chromosome_1: 2882845-2892844 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124110135 5260 Chlorophyte View MSA
123428704 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.675        
cufflinks 2.983        
cufflinks 4.832        
cufflinks 4.37        
cufflinks 3.155        
cufflinks 3.702        
cufflinks 4.425        
cufflinks 3.529        
cufflinks 1.216       Low
cufflinks 3.064        
cufflinks 4.499        
cufflinks 4.142        
cufflinks 5.033        
cufflinks 4.673        
cufflinks 2.783        
cufflinks 3.336        
cufflinks 1.077       Low
cufflinks 5.338        
cufflinks 2.274        
cufflinks 12.425       High
cufflinks 3.122        
cufflinks 0.961       Low
cufflinks 6.816       High
cufflinks 5.199        
cufflinks 0.674       Low
cufflinks 89.3158 0.0 182.363 High High
cufflinks 20.303 5.4927 35.1134   High
cufflinks 2.24138 0.0 5.13592   Low
cufflinks 12.1846 1.64734 22.722    
cufflinks 17.2896 3.37569 31.2035    

0 Strain