Gene : NOP52 C. reinhardtii v5.6
Primary Identifier:  ? Cre01.g019200 Defline:  (1 of 1) K14849 - ribosomal RNA-processing protein 1 (RRP1)
Genomic Order:  429 Name:  ? Cre01.g019200
Secondary Identifier:  ? PAC:30788766
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre01.g019200 0.5kb upstream 0.5kb upstream 5582 true chromosome_1: 3089576-3095157 Chlamydomonas reinhardtii
Cre01.g019200 0.5kb upstream 0.5kb upstream 500 false chromosome_1: 3089576-3090075 Chlamydomonas reinhardtii
Cre01.g019200 0.5kb downstream 0.5kb downstream 5582 true chromosome_1: 3090076-3095657 Chlamydomonas reinhardtii
Cre01.g019200 0.5kb downstream 0.5kb downstream 500 false chromosome_1: 3095158-3095657 Chlamydomonas reinhardtii
Cre01.g019200 1.0kb upstream 1.0kb upstream 6082 true chromosome_1: 3089076-3095157 Chlamydomonas reinhardtii
Cre01.g019200 1.0kb upstream 1.0kb upstream 1000 false chromosome_1: 3089076-3090075 Chlamydomonas reinhardtii
Cre01.g019200 1.0kb downstream 1.0kb downstream 6082 true chromosome_1: 3090076-3096157 Chlamydomonas reinhardtii
Cre01.g019200 1.0kb downstream 1.0kb downstream 1000 false chromosome_1: 3095158-3096157 Chlamydomonas reinhardtii
Cre01.g019200 2.0kb upstream 2.0kb upstream 7082 true chromosome_1: 3088076-3095157 Chlamydomonas reinhardtii
Cre01.g019200 2.0kb upstream 2.0kb upstream 2000 false chromosome_1: 3088076-3090075 Chlamydomonas reinhardtii
Cre01.g019200 2.0kb downstream 2.0kb downstream 7082 true chromosome_1: 3090076-3097157 Chlamydomonas reinhardtii
Cre01.g019200 2.0kb downstream 2.0kb downstream 2000 false chromosome_1: 3095158-3097157 Chlamydomonas reinhardtii
Cre01.g019200 5.0kb upstream 5.0kb upstream 10082 true chromosome_1: 3085076-3095157 Chlamydomonas reinhardtii
Cre01.g019200 5.0kb upstream 5.0kb upstream 5000 false chromosome_1: 3085076-3090075 Chlamydomonas reinhardtii
Cre01.g019200 5.0kb downstream 5.0kb downstream 10082 true chromosome_1: 3090076-3100157 Chlamydomonas reinhardtii
Cre01.g019200 5.0kb downstream 5.0kb downstream 5000 false chromosome_1: 3095158-3100157 Chlamydomonas reinhardtii
Cre01.g019200 10.0kb upstream 10.0kb upstream 15082 true chromosome_1: 3080076-3095157 Chlamydomonas reinhardtii
Cre01.g019200 10.0kb upstream 10.0kb upstream 10000 false chromosome_1: 3080076-3090075 Chlamydomonas reinhardtii
Cre01.g019200 10.0kb downstream 10.0kb downstream 15082 true chromosome_1: 3090076-3105157 Chlamydomonas reinhardtii
Cre01.g019200 10.0kb downstream 10.0kb downstream 10000 false chromosome_1: 3095158-3105157 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124097947 5260 Chlorophyte View MSA
123424078 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.279        
cufflinks 2.676        
cufflinks 1.566        
cufflinks 2.481        
cufflinks 1.863        
cufflinks 2.384        
cufflinks 2.467        
cufflinks 2.668        
cufflinks 1.311        
cufflinks 1.164        
cufflinks 2.37        
cufflinks 2.602        
cufflinks 1.206        
cufflinks 2.323        
cufflinks 1.932        
cufflinks 2.081        
cufflinks 0.161       Low
cufflinks 1.54        
cufflinks 1.297        
cufflinks 2.815        
cufflinks 2.028        
cufflinks 0.507       Low
cufflinks 3.745       High
cufflinks 2.58        
cufflinks 0.289       Low
cufflinks 20.6944 0.621348 40.7675   High
cufflinks 6.22808 1.5919 10.8643    
cufflinks 0.694288 0.0 1.76517    
cufflinks 6.28303 0.933017 11.633   Low
cufflinks 11.1059 2.14865 20.0632   High

0 Strain