Gene : MMP4 C. reinhardtii v5.6
Primary Identifier:  ? Cre01.g025200 Defline:  (1 of 37) 3.4.24.38 - Gametolysin / Lysin
Genomic Order:  554 Name:  ? Cre01.g025200
Secondary Identifier:  ? PAC:30789355
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre01.g025200 0.5kb upstream 0.5kb upstream 5416 true chromosome_1: 3877297-3882712 Chlamydomonas reinhardtii
Cre01.g025200 0.5kb upstream 0.5kb upstream 500 false chromosome_1: 3882213-3882712 Chlamydomonas reinhardtii
Cre01.g025200 0.5kb downstream 0.5kb downstream 5416 true chromosome_1: 3876797-3882212 Chlamydomonas reinhardtii
Cre01.g025200 0.5kb downstream 0.5kb downstream 500 false chromosome_1: 3876797-3877296 Chlamydomonas reinhardtii
Cre01.g025200 1.0kb upstream 1.0kb upstream 5916 true chromosome_1: 3877297-3883212 Chlamydomonas reinhardtii
Cre01.g025200 1.0kb upstream 1.0kb upstream 1000 false chromosome_1: 3882213-3883212 Chlamydomonas reinhardtii
Cre01.g025200 1.0kb downstream 1.0kb downstream 5916 true chromosome_1: 3876297-3882212 Chlamydomonas reinhardtii
Cre01.g025200 1.0kb downstream 1.0kb downstream 1000 false chromosome_1: 3876297-3877296 Chlamydomonas reinhardtii
Cre01.g025200 2.0kb upstream 2.0kb upstream 6916 true chromosome_1: 3877297-3884212 Chlamydomonas reinhardtii
Cre01.g025200 2.0kb upstream 2.0kb upstream 2000 false chromosome_1: 3882213-3884212 Chlamydomonas reinhardtii
Cre01.g025200 2.0kb downstream 2.0kb downstream 6916 true chromosome_1: 3875297-3882212 Chlamydomonas reinhardtii
Cre01.g025200 2.0kb downstream 2.0kb downstream 2000 false chromosome_1: 3875297-3877296 Chlamydomonas reinhardtii
Cre01.g025200 5.0kb upstream 5.0kb upstream 9916 true chromosome_1: 3877297-3887212 Chlamydomonas reinhardtii
Cre01.g025200 5.0kb upstream 5.0kb upstream 5000 false chromosome_1: 3882213-3887212 Chlamydomonas reinhardtii
Cre01.g025200 5.0kb downstream 5.0kb downstream 9916 true chromosome_1: 3872297-3882212 Chlamydomonas reinhardtii
Cre01.g025200 5.0kb downstream 5.0kb downstream 5000 false chromosome_1: 3872297-3877296 Chlamydomonas reinhardtii
Cre01.g025200 10.0kb upstream 10.0kb upstream 14916 true chromosome_1: 3877297-3892212 Chlamydomonas reinhardtii
Cre01.g025200 10.0kb upstream 10.0kb upstream 10000 false chromosome_1: 3882213-3892212 Chlamydomonas reinhardtii
Cre01.g025200 10.0kb downstream 10.0kb downstream 14916 true chromosome_1: 3867297-3882212 Chlamydomonas reinhardtii
Cre01.g025200 10.0kb downstream 10.0kb downstream 10000 false chromosome_1: 3867297-3877296 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124094274 5260 Chlorophyte View MSA
123411159 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.554       Low
cufflinks 1.96        
cufflinks 2.224        
cufflinks 2.334        
cufflinks 0.855        
cufflinks 1.959        
cufflinks 1.95        
cufflinks 2.023        
cufflinks 0.288       Low
cufflinks 0.346       Low
cufflinks 2.629        
cufflinks 2.133        
cufflinks 0.583       Low
cufflinks 2.316        
cufflinks 2.031        
cufflinks 1.715        
cufflinks 1.801        
cufflinks 1.236        
cufflinks 1.647        
cufflinks 13.64     High High
cufflinks 2.069        
cufflinks 1.115        
cufflinks 1.801        
cufflinks 2.557        
cufflinks 1.136        
cufflinks 0.188749 0.0 0.426736 Low  
cufflinks 2.74257 0.186268 5.29888    
cufflinks 5.11057 0.0 10.4739    
cufflinks 0.695915 0.0 1.42648   High
cufflinks 1.44138 0.0113269 2.87144   Low

0 Strain