Gene : SRR24A C. reinhardtii v5.6
Primary Identifier:  ? Cre01.g002787 Defline:  (1 of 1) PF00059//PF00530//PF00704//PF03762 - Lectin C-type domain (Lectin_C) // Scavenger receptor cysteine-rich domain (SRCR) // Glycosyl hydrolases family 18 (Glyco_hydro_18) // Vitelline membrane outer layer protein I (VOMI) (VOMI)
Genomic Order:  64 Name:  ? Cre01.g002787
Secondary Identifier:  ? PAC:30789171
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

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Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre01.g002787 0.5kb upstream 0.5kb upstream 31112 true chromosome_1: 473206-504317 Chlamydomonas reinhardtii
Cre01.g002787 0.5kb upstream 0.5kb upstream 500 false chromosome_1: 473206-473705 Chlamydomonas reinhardtii
Cre01.g002787 0.5kb downstream 0.5kb downstream 31112 true chromosome_1: 473706-504817 Chlamydomonas reinhardtii
Cre01.g002787 0.5kb downstream 0.5kb downstream 500 false chromosome_1: 504318-504817 Chlamydomonas reinhardtii
Cre01.g002787 1.0kb upstream 1.0kb upstream 31612 true chromosome_1: 472706-504317 Chlamydomonas reinhardtii
Cre01.g002787 1.0kb upstream 1.0kb upstream 1000 false chromosome_1: 472706-473705 Chlamydomonas reinhardtii
Cre01.g002787 1.0kb downstream 1.0kb downstream 31612 true chromosome_1: 473706-505317 Chlamydomonas reinhardtii
Cre01.g002787 1.0kb downstream 1.0kb downstream 1000 false chromosome_1: 504318-505317 Chlamydomonas reinhardtii
Cre01.g002787 2.0kb upstream 2.0kb upstream 32612 true chromosome_1: 471706-504317 Chlamydomonas reinhardtii
Cre01.g002787 2.0kb upstream 2.0kb upstream 2000 false chromosome_1: 471706-473705 Chlamydomonas reinhardtii
Cre01.g002787 2.0kb downstream 2.0kb downstream 32612 true chromosome_1: 473706-506317 Chlamydomonas reinhardtii
Cre01.g002787 2.0kb downstream 2.0kb downstream 2000 false chromosome_1: 504318-506317 Chlamydomonas reinhardtii
Cre01.g002787 5.0kb upstream 5.0kb upstream 35612 true chromosome_1: 468706-504317 Chlamydomonas reinhardtii
Cre01.g002787 5.0kb upstream 5.0kb upstream 5000 false chromosome_1: 468706-473705 Chlamydomonas reinhardtii
Cre01.g002787 5.0kb downstream 5.0kb downstream 35612 true chromosome_1: 473706-509317 Chlamydomonas reinhardtii
Cre01.g002787 5.0kb downstream 5.0kb downstream 5000 false chromosome_1: 504318-509317 Chlamydomonas reinhardtii
Cre01.g002787 10.0kb upstream 10.0kb upstream 40612 true chromosome_1: 463706-504317 Chlamydomonas reinhardtii
Cre01.g002787 10.0kb upstream 10.0kb upstream 10000 false chromosome_1: 463706-473705 Chlamydomonas reinhardtii
Cre01.g002787 10.0kb downstream 10.0kb downstream 40612 true chromosome_1: 473706-514317 Chlamydomonas reinhardtii
Cre01.g002787 10.0kb downstream 10.0kb downstream 10000 false chromosome_1: 504318-514317 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124081893 5260 Chlorophyte View MSA
123399595 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.016     Low Low
cufflinks 0.068     Low  
cufflinks 0.093     Low  
cufflinks 0.178     Low  
cufflinks 0.047     Low  
cufflinks 0.043     Low  
cufflinks 0.089     Low  
cufflinks 0.323       High
cufflinks 0.03     Low  
cufflinks 0.005     Low Low
cufflinks 0.384       High
cufflinks 0.239        
cufflinks 0.017     Low Low
cufflinks 0.03     Low  
cufflinks 0.129     Low  
cufflinks 0.036     Low  
cufflinks 0.134        
cufflinks 0.085     Low  
cufflinks 0.002     Low Low
cufflinks 0.089     Low  
cufflinks 0.136     Low  
cufflinks 0.065     Low  
cufflinks 0.061     Low  
cufflinks 0.692       High
cufflinks 0.232        
cufflinks 0.234143 0.00165201 0.466635 Low  
cufflinks 2.53218 0.669061 4.39531    
cufflinks 0.269067 0.0 0.664712 Low  
cufflinks 0.286496 0.00988365 0.563108    
cufflinks 0.724861 0.0892163 1.36051    

0 Strain