Gene : Cre01.g001600 C. reinhardtii v5.6
Defline:  (1 of 55) PF00651 - BTB/POZ domain (BTB) Genomic Order:  33
Name:  ? Cre01.g001600 Secondary Identifier:  ? PAC:30788856
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre01.g001600 0.5kb upstream 0.5kb upstream 3586 true chromosome_1: 244602-248187 Chlamydomonas reinhardtii
Cre01.g001600 0.5kb upstream 0.5kb upstream 500 false chromosome_1: 244602-245101 Chlamydomonas reinhardtii
Cre01.g001600 0.5kb downstream 0.5kb downstream 3586 true chromosome_1: 245102-248687 Chlamydomonas reinhardtii
Cre01.g001600 0.5kb downstream 0.5kb downstream 500 false chromosome_1: 248188-248687 Chlamydomonas reinhardtii
Cre01.g001600 1.0kb upstream 1.0kb upstream 4086 true chromosome_1: 244102-248187 Chlamydomonas reinhardtii
Cre01.g001600 1.0kb upstream 1.0kb upstream 1000 false chromosome_1: 244102-245101 Chlamydomonas reinhardtii
Cre01.g001600 1.0kb downstream 1.0kb downstream 4086 true chromosome_1: 245102-249187 Chlamydomonas reinhardtii
Cre01.g001600 1.0kb downstream 1.0kb downstream 1000 false chromosome_1: 248188-249187 Chlamydomonas reinhardtii
Cre01.g001600 2.0kb upstream 2.0kb upstream 5086 true chromosome_1: 243102-248187 Chlamydomonas reinhardtii
Cre01.g001600 2.0kb upstream 2.0kb upstream 2000 false chromosome_1: 243102-245101 Chlamydomonas reinhardtii
Cre01.g001600 2.0kb downstream 2.0kb downstream 5086 true chromosome_1: 245102-250187 Chlamydomonas reinhardtii
Cre01.g001600 2.0kb downstream 2.0kb downstream 2000 false chromosome_1: 248188-250187 Chlamydomonas reinhardtii
Cre01.g001600 5.0kb upstream 5.0kb upstream 8086 true chromosome_1: 240102-248187 Chlamydomonas reinhardtii
Cre01.g001600 5.0kb upstream 5.0kb upstream 5000 false chromosome_1: 240102-245101 Chlamydomonas reinhardtii
Cre01.g001600 5.0kb downstream 5.0kb downstream 8086 true chromosome_1: 245102-253187 Chlamydomonas reinhardtii
Cre01.g001600 5.0kb downstream 5.0kb downstream 5000 false chromosome_1: 248188-253187 Chlamydomonas reinhardtii
Cre01.g001600 10.0kb upstream 10.0kb upstream 13086 true chromosome_1: 235102-248187 Chlamydomonas reinhardtii
Cre01.g001600 10.0kb upstream 10.0kb upstream 10000 false chromosome_1: 235102-245101 Chlamydomonas reinhardtii
Cre01.g001600 10.0kb downstream 10.0kb downstream 13086 true chromosome_1: 245102-258187 Chlamydomonas reinhardtii
Cre01.g001600 10.0kb downstream 10.0kb downstream 10000 false chromosome_1: 248188-258187 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124094118 5260 Chlorophyte View MSA
123429159 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.796        
cufflinks 0.121       Low
cufflinks 2.224        
cufflinks 7.143       High
cufflinks 4.946        
cufflinks 2.084        
cufflinks 3.51        
cufflinks 4.468        
cufflinks 0.122       Low
cufflinks 1.525        
cufflinks 5.223        
cufflinks 2.898        
cufflinks 2.18        
cufflinks 2.436        
cufflinks 2.522        
cufflinks 0.208       Low
cufflinks 0.399       Low
cufflinks 3.241        
cufflinks 1.653        
cufflinks 4.41        
cufflinks 2.786        
cufflinks 0.3       Low
cufflinks 1.863        
cufflinks 3.698        
cufflinks 0.219       Low
cufflinks 1.11232 0.00647165 2.21817   High
cufflinks 1.53041 0.0 3.14464    
cufflinks 4.10303 0.0 8.65595   High
cufflinks 3.56061 0.546277 6.57495   High
cufflinks 6.60848 1.2647 11.9522    

0 Strain