Gene : Cre01.g003300 C. reinhardtii v5.6
Defline:  (1 of 2) PTHR30483//PTHR30483:SF6 - LEUCINE-SPECIFIC-BINDING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  75
Name:  ? Cre01.g003300 Secondary Identifier:  ? PAC:30789158
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre01.g003300 0.5kb upstream 0.5kb upstream 5902 true chromosome_1: 565726-571627 Chlamydomonas reinhardtii
Cre01.g003300 0.5kb upstream 0.5kb upstream 500 false chromosome_1: 565726-566225 Chlamydomonas reinhardtii
Cre01.g003300 0.5kb downstream 0.5kb downstream 5902 true chromosome_1: 566226-572127 Chlamydomonas reinhardtii
Cre01.g003300 0.5kb downstream 0.5kb downstream 500 false chromosome_1: 571628-572127 Chlamydomonas reinhardtii
Cre01.g003300 1.0kb upstream 1.0kb upstream 6402 true chromosome_1: 565226-571627 Chlamydomonas reinhardtii
Cre01.g003300 1.0kb upstream 1.0kb upstream 1000 false chromosome_1: 565226-566225 Chlamydomonas reinhardtii
Cre01.g003300 1.0kb downstream 1.0kb downstream 6402 true chromosome_1: 566226-572627 Chlamydomonas reinhardtii
Cre01.g003300 1.0kb downstream 1.0kb downstream 1000 false chromosome_1: 571628-572627 Chlamydomonas reinhardtii
Cre01.g003300 2.0kb upstream 2.0kb upstream 7402 true chromosome_1: 564226-571627 Chlamydomonas reinhardtii
Cre01.g003300 2.0kb upstream 2.0kb upstream 2000 false chromosome_1: 564226-566225 Chlamydomonas reinhardtii
Cre01.g003300 2.0kb downstream 2.0kb downstream 7402 true chromosome_1: 566226-573627 Chlamydomonas reinhardtii
Cre01.g003300 2.0kb downstream 2.0kb downstream 2000 false chromosome_1: 571628-573627 Chlamydomonas reinhardtii
Cre01.g003300 5.0kb upstream 5.0kb upstream 10402 true chromosome_1: 561226-571627 Chlamydomonas reinhardtii
Cre01.g003300 5.0kb upstream 5.0kb upstream 5000 false chromosome_1: 561226-566225 Chlamydomonas reinhardtii
Cre01.g003300 5.0kb downstream 5.0kb downstream 10402 true chromosome_1: 566226-576627 Chlamydomonas reinhardtii
Cre01.g003300 5.0kb downstream 5.0kb downstream 5000 false chromosome_1: 571628-576627 Chlamydomonas reinhardtii
Cre01.g003300 10.0kb upstream 10.0kb upstream 15402 true chromosome_1: 556226-571627 Chlamydomonas reinhardtii
Cre01.g003300 10.0kb upstream 10.0kb upstream 10000 false chromosome_1: 556226-566225 Chlamydomonas reinhardtii
Cre01.g003300 10.0kb downstream 10.0kb downstream 15402 true chromosome_1: 566226-581627 Chlamydomonas reinhardtii
Cre01.g003300 10.0kb downstream 10.0kb downstream 10000 false chromosome_1: 571628-581627 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124080399 5260 Chlorophyte Singleton cluster - no MSA
123398185 5275 Viridiplantae Singleton cluster - no MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low  
cufflinks 0.005     Low  
cufflinks 0.006     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.013     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.13     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.14     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.16579 0.0 0.444042 Low High

0 Strain