Gene : Cre01.g008000 C. reinhardtii v5.6
Defline:  (1 of 1) K18666 - activating signal cointegrator complex subunit 1 (ASCC1) Genomic Order:  189
Name:  ? Cre01.g008000 Secondary Identifier:  ? PAC:30789116
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre01.g008000 0.5kb upstream 0.5kb upstream 6336 true chromosome_1: 1539112-1545447 Chlamydomonas reinhardtii
Cre01.g008000 0.5kb upstream 0.5kb upstream 500 false chromosome_1: 1544948-1545447 Chlamydomonas reinhardtii
Cre01.g008000 0.5kb downstream 0.5kb downstream 6336 true chromosome_1: 1538612-1544947 Chlamydomonas reinhardtii
Cre01.g008000 0.5kb downstream 0.5kb downstream 500 false chromosome_1: 1538612-1539111 Chlamydomonas reinhardtii
Cre01.g008000 1.0kb upstream 1.0kb upstream 6836 true chromosome_1: 1539112-1545947 Chlamydomonas reinhardtii
Cre01.g008000 1.0kb upstream 1.0kb upstream 1000 false chromosome_1: 1544948-1545947 Chlamydomonas reinhardtii
Cre01.g008000 1.0kb downstream 1.0kb downstream 6836 true chromosome_1: 1538112-1544947 Chlamydomonas reinhardtii
Cre01.g008000 1.0kb downstream 1.0kb downstream 1000 false chromosome_1: 1538112-1539111 Chlamydomonas reinhardtii
Cre01.g008000 2.0kb upstream 2.0kb upstream 7836 true chromosome_1: 1539112-1546947 Chlamydomonas reinhardtii
Cre01.g008000 2.0kb upstream 2.0kb upstream 2000 false chromosome_1: 1544948-1546947 Chlamydomonas reinhardtii
Cre01.g008000 2.0kb downstream 2.0kb downstream 7836 true chromosome_1: 1537112-1544947 Chlamydomonas reinhardtii
Cre01.g008000 2.0kb downstream 2.0kb downstream 2000 false chromosome_1: 1537112-1539111 Chlamydomonas reinhardtii
Cre01.g008000 5.0kb upstream 5.0kb upstream 10836 true chromosome_1: 1539112-1549947 Chlamydomonas reinhardtii
Cre01.g008000 5.0kb upstream 5.0kb upstream 5000 false chromosome_1: 1544948-1549947 Chlamydomonas reinhardtii
Cre01.g008000 5.0kb downstream 5.0kb downstream 10836 true chromosome_1: 1534112-1544947 Chlamydomonas reinhardtii
Cre01.g008000 5.0kb downstream 5.0kb downstream 5000 false chromosome_1: 1534112-1539111 Chlamydomonas reinhardtii
Cre01.g008000 10.0kb upstream 10.0kb upstream 15836 true chromosome_1: 1539112-1554947 Chlamydomonas reinhardtii
Cre01.g008000 10.0kb upstream 10.0kb upstream 10000 false chromosome_1: 1544948-1554947 Chlamydomonas reinhardtii
Cre01.g008000 10.0kb downstream 10.0kb downstream 15836 true chromosome_1: 1529112-1544947 Chlamydomonas reinhardtii
Cre01.g008000 10.0kb downstream 10.0kb downstream 10000 false chromosome_1: 1529112-1539111 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124094092 5260 Chlorophyte View MSA
123426629 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.966        
cufflinks 0.995        
cufflinks 1.084       High
cufflinks 0.989        
cufflinks 0.9        
cufflinks 0.996        
cufflinks 1.037        
cufflinks 1.105       High
cufflinks 0.759        
cufflinks 0.504       Low
cufflinks 0.791        
cufflinks 0.911        
cufflinks 0.867        
cufflinks 0.853        
cufflinks 0.755        
cufflinks 0.946        
cufflinks 0.719        
cufflinks 0.817        
cufflinks 0.463       Low
cufflinks 1.035        
cufflinks 0.867        
cufflinks 0.743        
cufflinks 0.915        
cufflinks 0.889        
cufflinks 0.709        
cufflinks 1.95596 0.0689404 3.84299   Low
cufflinks 4.96814 0.606815 9.32947    
cufflinks 3.1118 0.0 7.00278   High
cufflinks 2.70761 0.21644 5.19879    
cufflinks 3.14844 0.202292 6.09459    

0 Strain