Protein Family : Predicted eukaryotic LigT 123426629

Method ID:  5275 Method Name:  Viridiplantae
Sequence Alignment:  View MSA Member Count:  80

80 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
30146.t000120 (1 of 1) K18666 - activating signal cointegrator complex subunit 1 (ASCC1) R. communis v0.1 3819   30146: 895605-899423
Cucsa.359330 (1 of 1) PTHR13360:SF1 - ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 1 C. sativus v1.0 5954   scaffold03588: 288036-293989
orange1.1g010205m.g (1 of 1) PTHR13360:SF1 - ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 1 C. sinensis v1.1 5817   scaffold00096: 376124-381940
AT3G16230 (1 of 1) K18666 - activating signal cointegrator complex subunit 1 (ASCC1) A. thaliana TAIR10 3368   Chr3: 5500178-5503545
AT3G16220 (1 of 2) PTHR13360//PTHR13360:SF1 - FAMILY NOT NAMED // ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 1 A. thaliana TAIR10 1639   Chr3: 5497597-5499235
Thhalv10020736m.g (1 of 1) KOG2814 - Transcription coactivator complex, P50 component (LigT RNA ligase/phosphodiesterase family) E. salsugineum v1.0 3047   scaffold_13: 3849153-3852199
Thhalv10021339m.g (1 of 2) PTHR13360:SF1 - ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 1 E. salsugineum v1.0 1635   scaffold_13: 3852655-3854289
Ciclev10025383m.g (1 of 1) PTHR13360:SF1 - ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 1 C. clementina v1.0 6087   scaffold_7: 8681726-8687812
Lus10037578.g (1 of 2) PTHR13360:SF1 - ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 1 L. usitatissimum v1.0 2731   scaffold196: 613543-616273
Gorai.003G064100 (1 of 2) PTHR13360:SF1 - ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 1 G. raimondii v2.1 7489   Chr03: 12408338-12415826
gw2.16.176.1 (1 of 1) PTHR13360:SF1 - ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 1 M. sp RCC299 v3.0 639   Chr_16: 263420-264058
Thecc1EG028835 (1 of 1) K18666 - activating signal cointegrator complex subunit 1 (ASCC1) T. cacao v1.1 9082   scaffold_6: 18762932-18772013
Araha.50576s0003 (1 of 1) KOG2814 - Transcription coactivator complex, P50 component (LigT RNA ligase/phosphodiesterase family) A. halleri v1.1 3026   Scaffold50576: 5148-8173
Cagra.6624s0018 (1 of 1) KOG2814 - Transcription coactivator complex, P50 component (LigT RNA ligase/phosphodiesterase family) C. grandiflora v1.1 2995   Scaffold6624: 70723-73717
Cagra.6624s0019 (1 of 2) PTHR13360:SF1 - ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 1 C. grandiflora v1.1 1718   Scaffold6624: 73846-75563
Glyma.13G355900 (1 of 2) PTHR13360:SF1 - ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 1 G. max Wm82.a2.v1 2576   Chr13: 44435936-44438511
Glyma.15G018200 (1 of 1) KOG2814 - Transcription coactivator complex, P50 component (LigT RNA ligase/phosphodiesterase family) G. max Wm82.a2.v1 6092   Chr15: 1399656-1405747
Brara.A03069 (1 of 3) PTHR13360:SF1 - ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 1 B. rapa FPsc v1.3 2223   A01: 26022632-26024854
Brara.A03070 (1 of 3) PTHR13360:SF1 - ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 1 B. rapa FPsc v1.3 1731   A01: 26026848-26028578
Brara.C03602 (1 of 1) KOG2814 - Transcription coactivator complex, P50 component (LigT RNA ligase/phosphodiesterase family) B. rapa FPsc v1.3 2604   A03: 18482314-18484917
Bostr.28625s0067 (1 of 1) KOG2814 - Transcription coactivator complex, P50 component (LigT RNA ligase/phosphodiesterase family) B. stricta v1.2 3198   Scaffold28625: 451407-454604
Bostr.28625s0068 (1 of 2) PTHR13360:SF1 - ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 1 B. stricta v1.2 1842   Scaffold28625: 454804-456645
Cre01.g008000 (1 of 1) K18666 - activating signal cointegrator complex subunit 1 (ASCC1) C. reinhardtii v5.6 5836   chromosome_1: 1539112-1544947
Medtr2g101350 (1 of 1) PTHR13360:SF1 - ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 1 M. truncatula Mt4.0v1 7066   chr2: 43569443-43576508
SapurV1A.0805s0190 (1 of 1) K18666 - activating signal cointegrator complex subunit 1 (ASCC1) S. purpurea v1.0 5835   chr01: 16338302-16344136
SapurV1A.2712s0030 (1 of 2) PF10469 - AKAP7 2'5' RNA ligase-like domain (AKAP7_NLS) S. purpurea v1.0 2337   chr01: 16181013-16183349
evm_27.TU.AmTr_v1.0_scaffold00109.154 (1 of 3) PTHR13360:SF1 - ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 1 A. trichopoda v1.0 4799   AmTr_v1.0_scaffold00109: 2054828-2059626
evm_27.TU.AmTr_v1.0_scaffold00109.152 (1 of 1) KOG2814 - Transcription coactivator complex, P50 component (LigT RNA ligase/phosphodiesterase family) A. trichopoda v1.0 10704   AmTr_v1.0_scaffold00109: 2023186-2033889
Eucgr.F03052 (1 of 1) PTHR13360:SF1 - ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 1 E. grandis v2.0 8481   Chr06: 42497147-42505627
GSMUA_Achr10G22230_001 (1 of 1) PTHR32208:SF29 - F1N21.11-RELATED M. acuminata v1 12853   chr10: 27477906-27490758

80 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
30146.m003543 R. communis v0.1 123426629 Predicted eukaryotic LigT 1 5275 Viridiplantae
Cucsa.359330.1 C. sativus v1.0 123426629 Predicted eukaryotic LigT 1 5275 Viridiplantae
orange1.1g010205m C. sinensis v1.1 123426629 Predicted eukaryotic LigT 1 5275 Viridiplantae
AT3G16220.1 A. thaliana TAIR10 123426629 Predicted eukaryotic LigT 2 5275 Viridiplantae
AT3G16230.2 A. thaliana TAIR10 123426629 Predicted eukaryotic LigT 2 5275 Viridiplantae
Thhalv10020736m E. salsugineum v1.0 123426629 Predicted eukaryotic LigT 2 5275 Viridiplantae
Thhalv10021339m E. salsugineum v1.0 123426629 Predicted eukaryotic LigT 2 5275 Viridiplantae
Ciclev10025383m C. clementina v1.0 123426629 Predicted eukaryotic LigT 1 5275 Viridiplantae
Lus10037578 L. usitatissimum v1.0 123426629 Predicted eukaryotic LigT 1 5275 Viridiplantae
Gorai.003G064100.1 G. raimondii v2.1 123426629 Predicted eukaryotic LigT 1 5275 Viridiplantae
71934 M. sp RCC299 v3.0 123426629 Predicted eukaryotic LigT 1 5275 Viridiplantae
Thecc1EG028835t1 T. cacao v1.1 123426629 Predicted eukaryotic LigT 1 5275 Viridiplantae
Araha.50576s0003.1.p A. halleri v1.1 123426629 Predicted eukaryotic LigT 1 5275 Viridiplantae
Cagra.6624s0018.1.p C. grandiflora v1.1 123426629 Predicted eukaryotic LigT 2 5275 Viridiplantae
Cagra.6624s0019.1.p C. grandiflora v1.1 123426629 Predicted eukaryotic LigT 2 5275 Viridiplantae
Glyma.13G355900.1.p G. max Wm82.a2.v1 123426629 Predicted eukaryotic LigT 2 5275 Viridiplantae
Glyma.15G018200.1.p G. max Wm82.a2.v1 123426629 Predicted eukaryotic LigT 2 5275 Viridiplantae
Brara.A03070.1.p B. rapa FPsc v1.3 123426629 Predicted eukaryotic LigT 3 5275 Viridiplantae
Brara.C03602.1.p B. rapa FPsc v1.3 123426629 Predicted eukaryotic LigT 3 5275 Viridiplantae
Brara.A03069.1.p B. rapa FPsc v1.3 123426629 Predicted eukaryotic LigT 3 5275 Viridiplantae
Bostr.28625s0067.1.p B. stricta v1.2 123426629 Predicted eukaryotic LigT 2 5275 Viridiplantae
Bostr.28625s0068.1.p B. stricta v1.2 123426629 Predicted eukaryotic LigT 2 5275 Viridiplantae
Cre01.g008000.t1.2 C. reinhardtii v5.6 123426629 Predicted eukaryotic LigT 1 5275 Viridiplantae
Medtr2g101350.1 M. truncatula Mt4.0v1 123426629 Predicted eukaryotic LigT 1 5275 Viridiplantae
SapurV1A.2712s0030.1.p S. purpurea v1.0 123426629 Predicted eukaryotic LigT 2 5275 Viridiplantae
SapurV1A.0805s0190.1.p S. purpurea v1.0 123426629 Predicted eukaryotic LigT 2 5275 Viridiplantae
evm_27.model.AmTr_v1.0_scaffold00109.154 A. trichopoda v1.0 123426629 Predicted eukaryotic LigT 2 5275 Viridiplantae
evm_27.model.AmTr_v1.0_scaffold00109.152 A. trichopoda v1.0 123426629 Predicted eukaryotic LigT 2 5275 Viridiplantae
Eucgr.F03052.1.p E. grandis v2.0 123426629 Predicted eukaryotic LigT 1 5275 Viridiplantae
GSMUA_Achr10P22230_001 M. acuminata v1 123426629 Predicted eukaryotic LigT 1 5275 Viridiplantae