Gene : AT3G16230 A. thaliana TAIR10
Defline:  (1 of 1) K18666 - activating signal cointegrator complex subunit 1 (ASCC1) Genomic Order:  1665
Name:  ? AT3G16230 Secondary Identifier:  ? PAC:19664594
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G16230 0.5kb upstream 0.5kb upstream 3868 true Chr3: 5499678-5503545 Arabidopsis thaliana
AT3G16230 0.5kb upstream 0.5kb upstream 500 false Chr3: 5499678-5500177 Arabidopsis thaliana
AT3G16230 0.5kb downstream 0.5kb downstream 3868 true Chr3: 5500178-5504045 Arabidopsis thaliana
AT3G16230 0.5kb downstream 0.5kb downstream 500 false Chr3: 5503546-5504045 Arabidopsis thaliana
AT3G16230 1.0kb upstream 1.0kb upstream 4368 true Chr3: 5499178-5503545 Arabidopsis thaliana
AT3G16230 1.0kb upstream 1.0kb upstream 1000 false Chr3: 5499178-5500177 Arabidopsis thaliana
AT3G16230 1.0kb downstream 1.0kb downstream 4368 true Chr3: 5500178-5504545 Arabidopsis thaliana
AT3G16230 1.0kb downstream 1.0kb downstream 1000 false Chr3: 5503546-5504545 Arabidopsis thaliana
AT3G16230 2.0kb upstream 2.0kb upstream 5368 true Chr3: 5498178-5503545 Arabidopsis thaliana
AT3G16230 2.0kb upstream 2.0kb upstream 2000 false Chr3: 5498178-5500177 Arabidopsis thaliana
AT3G16230 2.0kb downstream 2.0kb downstream 5368 true Chr3: 5500178-5505545 Arabidopsis thaliana
AT3G16230 2.0kb downstream 2.0kb downstream 2000 false Chr3: 5503546-5505545 Arabidopsis thaliana
AT3G16230 5.0kb upstream 5.0kb upstream 8368 true Chr3: 5495178-5503545 Arabidopsis thaliana
AT3G16230 5.0kb upstream 5.0kb upstream 5000 false Chr3: 5495178-5500177 Arabidopsis thaliana
AT3G16230 5.0kb downstream 5.0kb downstream 8368 true Chr3: 5500178-5508545 Arabidopsis thaliana
AT3G16230 5.0kb downstream 5.0kb downstream 5000 false Chr3: 5503546-5508545 Arabidopsis thaliana
AT3G16230 10.0kb upstream 10.0kb upstream 13368 true Chr3: 5490178-5503545 Arabidopsis thaliana
AT3G16230 10.0kb upstream 10.0kb upstream 10000 false Chr3: 5490178-5500177 Arabidopsis thaliana
AT3G16230 10.0kb downstream 10.0kb downstream 13368 true Chr3: 5500178-5513545 Arabidopsis thaliana
AT3G16230 10.0kb downstream 10.0kb downstream 10000 false Chr3: 5503546-5513545 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371039 5261 Brassicaceae View MSA
123831204 5264 Brassicales-Malvales View MSA
124339505 5266 SBM View MSA
124242700 5268 Malvidae View MSA
124050184 5270 Rosid View MSA
123743611 5271 Pentapetalae View MSA
122791989 5272 Eudicot View MSA
122049684 5273 Angiosperm View MSA
121346215 5274 Embryophyte View MSA
123426629 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.687        
cufflinks 4.323       High
cufflinks 3.755        
cufflinks 3.81        
cufflinks 4.106        
cufflinks 3.793        

0 Strain