Protein Family : Predicted eukaryotic LigT 124242700

Method ID:  5268 Method Name:  Malvidae
Sequence Alignment:  View MSA Member Count:  18

18 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
30146.t000120 (1 of 1) K18666 - activating signal cointegrator complex subunit 1 (ASCC1) R. communis v0.1 3819   30146: 895605-899423
orange1.1g010205m.g (1 of 1) PTHR13360:SF1 - ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 1 C. sinensis v1.1 5817   scaffold00096: 376124-381940
AT3G16230 (1 of 1) K18666 - activating signal cointegrator complex subunit 1 (ASCC1) A. thaliana TAIR10 3368   Chr3: 5500178-5503545
Thhalv10020736m.g (1 of 1) KOG2814 - Transcription coactivator complex, P50 component (LigT RNA ligase/phosphodiesterase family) E. salsugineum v1.0 3047   scaffold_13: 3849153-3852199
Ciclev10025383m.g (1 of 1) PTHR13360:SF1 - ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 1 C. clementina v1.0 6087   scaffold_7: 8681726-8687812
Lus10037578.g (1 of 2) PTHR13360:SF1 - ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 1 L. usitatissimum v1.0 2731   scaffold196: 613543-616273
Gorai.003G064100 (1 of 2) PTHR13360:SF1 - ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 1 G. raimondii v2.1 7489   Chr03: 12408338-12415826
Thecc1EG028835 (1 of 1) K18666 - activating signal cointegrator complex subunit 1 (ASCC1) T. cacao v1.1 9082   scaffold_6: 18762932-18772013
Araha.50576s0003 (1 of 1) KOG2814 - Transcription coactivator complex, P50 component (LigT RNA ligase/phosphodiesterase family) A. halleri v1.1 3026   Scaffold50576: 5148-8173
Cagra.6624s0018 (1 of 1) KOG2814 - Transcription coactivator complex, P50 component (LigT RNA ligase/phosphodiesterase family) C. grandiflora v1.1 2995   Scaffold6624: 70723-73717
Brara.C03602 (1 of 1) KOG2814 - Transcription coactivator complex, P50 component (LigT RNA ligase/phosphodiesterase family) B. rapa FPsc v1.3 2604   A03: 18482314-18484917
Bostr.28625s0067 (1 of 1) KOG2814 - Transcription coactivator complex, P50 component (LigT RNA ligase/phosphodiesterase family) B. stricta v1.2 3198   Scaffold28625: 451407-454604
SapurV1A.0805s0190 (1 of 1) K18666 - activating signal cointegrator complex subunit 1 (ASCC1) S. purpurea v1.0 5835   chr01: 16338302-16344136
Manes.11G036600 (1 of 1) PTHR13360:SF4 - RNA BINDING / CATALYTIC M. esculenta v6.1 7828   Chromosome11: 3097450-3105277
AL3G28930 (1 of 2) K18666 - activating signal cointegrator complex subunit 1 (ASCC1) A. lyrata v2.1 3056   scaffold_3: 6820173-6823228
Potri.001G186600 (1 of 1) K18666 - activating signal cointegrator complex subunit 1 (ASCC1) P. trichocarpa v3.1 5575   Chr01: 16441636-16447210
Podel.01G197400 (1 of 2) K18666 - activating signal cointegrator complex subunit 1 (ASCC1) P. deltoides WV94 v2.1 5529   Chr01: 17366519-17372047
Carub.0003s1598 (1 of 2) K18666 - activating signal cointegrator complex subunit 1 (ASCC1) C. rubella v1.1 2930   scaffold_3: 5631439-5634368

18 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
30146.m003543 R. communis v0.1 124242700 Predicted eukaryotic LigT 1 5268 Malvidae
AT3G16230.2 A. thaliana TAIR10 124242700 Predicted eukaryotic LigT 1 5268 Malvidae
Thhalv10020736m E. salsugineum v1.0 124242700 Predicted eukaryotic LigT 1 5268 Malvidae
Gorai.003G064100.1 G. raimondii v2.1 124242700 Predicted eukaryotic LigT 1 5268 Malvidae
Cagra.6624s0018.1.p C. grandiflora v1.1 124242700 Predicted eukaryotic LigT 1 5268 Malvidae
Bostr.28625s0067.1.p B. stricta v1.2 124242700 Predicted eukaryotic LigT 1 5268 Malvidae
Carub.0003s1598.1.p C. rubella v1.1 124242700 Predicted eukaryotic LigT 1 5268 Malvidae
orange1.1g010205m C. sinensis v1.1 124242700 Predicted eukaryotic LigT 1 5268 Malvidae
Ciclev10025383m C. clementina v1.0 124242700 Predicted eukaryotic LigT 1 5268 Malvidae
Lus10037578 L. usitatissimum v1.0 124242700 Predicted eukaryotic LigT 1 5268 Malvidae
Thecc1EG028835t1 T. cacao v1.1 124242700 Predicted eukaryotic LigT 1 5268 Malvidae
Araha.50576s0003.1.p A. halleri v1.1 124242700 Predicted eukaryotic LigT 1 5268 Malvidae
Brara.C03602.1.p B. rapa FPsc v1.3 124242700 Predicted eukaryotic LigT 1 5268 Malvidae
SapurV1A.0805s0190.1.p S. purpurea v1.0 124242700 Predicted eukaryotic LigT 1 5268 Malvidae
Manes.11G036600.1.p M. esculenta v6.1 124242700 Predicted eukaryotic LigT 1 5268 Malvidae
AL3G28930.t1 A. lyrata v2.1 124242700 Predicted eukaryotic LigT 1 5268 Malvidae
Potri.001G186600.6.p P. trichocarpa v3.1 124242700 Predicted eukaryotic LigT 1 5268 Malvidae
Podel.01G197400.1.p P. deltoides WV94 v2.1 124242700 Predicted eukaryotic LigT 1 5268 Malvidae