Gene : Thhalv10020736m.g E. salsugineum v1.0

Defline:  (1 of 1) KOG2814 - Transcription coactivator complex, P50 component (LigT RNA ligase/phosphodiesterase family) Genomic Order:  793
Name:  ? Thhalv10020736m.g Secondary Identifier:  ? PAC:20183343

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10020736m.g 0.5kb upstream 0.5kb upstream 3547 true scaffold_13: 3849153-3852699 Eutrema salsugineum
Thhalv10020736m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_13: 3852200-3852699 Eutrema salsugineum
Thhalv10020736m.g 0.5kb downstream 0.5kb downstream 3547 true scaffold_13: 3848653-3852199 Eutrema salsugineum
Thhalv10020736m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_13: 3848653-3849152 Eutrema salsugineum
Thhalv10020736m.g 1.0kb upstream 1.0kb upstream 4047 true scaffold_13: 3849153-3853199 Eutrema salsugineum
Thhalv10020736m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_13: 3852200-3853199 Eutrema salsugineum
Thhalv10020736m.g 1.0kb downstream 1.0kb downstream 4047 true scaffold_13: 3848153-3852199 Eutrema salsugineum
Thhalv10020736m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_13: 3848153-3849152 Eutrema salsugineum
Thhalv10020736m.g 2.0kb upstream 2.0kb upstream 5047 true scaffold_13: 3849153-3854199 Eutrema salsugineum
Thhalv10020736m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_13: 3852200-3854199 Eutrema salsugineum
Thhalv10020736m.g 2.0kb downstream 2.0kb downstream 5047 true scaffold_13: 3847153-3852199 Eutrema salsugineum
Thhalv10020736m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_13: 3847153-3849152 Eutrema salsugineum
Thhalv10020736m.g 5.0kb upstream 5.0kb upstream 8047 true scaffold_13: 3849153-3857199 Eutrema salsugineum
Thhalv10020736m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_13: 3852200-3857199 Eutrema salsugineum
Thhalv10020736m.g 5.0kb downstream 5.0kb downstream 8047 true scaffold_13: 3844153-3852199 Eutrema salsugineum
Thhalv10020736m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_13: 3844153-3849152 Eutrema salsugineum
Thhalv10020736m.g 10.0kb upstream 10.0kb upstream 13047 true scaffold_13: 3849153-3862199 Eutrema salsugineum
Thhalv10020736m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_13: 3852200-3862199 Eutrema salsugineum
Thhalv10020736m.g 10.0kb downstream 10.0kb downstream 13047 true scaffold_13: 3839153-3852199 Eutrema salsugineum
Thhalv10020736m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_13: 3839153-3849152 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371039 5261 Brassicaceae View MSA
123831204 5264 Brassicales-Malvales View MSA
124339505 5266 SBM View MSA
124242700 5268 Malvidae View MSA
124050184 5270 Rosid View MSA
123743611 5271 Pentapetalae View MSA
122791989 5272 Eudicot View MSA
122049684 5273 Angiosperm View MSA
121346215 5274 Embryophyte View MSA
123426629 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain