Gene : AL3G28930 A. lyrata v2.1

Defline:  (1 of 2) K18666 - activating signal cointegrator complex subunit 1 (ASCC1) Genomic Order:  1801
Name:  ? AL3G28930 Secondary Identifier:  ? PAC:35943339

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G28930 0.5kb upstream 0.5kb upstream 3556   true scaffold_3: 6819673-6823228 Arabidopsis lyrata
AL3G28930 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 6819673-6820172 Arabidopsis lyrata
AL3G28930 0.5kb downstream 0.5kb downstream 3556   true scaffold_3: 6820173-6823728 Arabidopsis lyrata
AL3G28930 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 6823229-6823728 Arabidopsis lyrata
AL3G28930 1.0kb upstream 1.0kb upstream 4056   true scaffold_3: 6819173-6823228 Arabidopsis lyrata
AL3G28930 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 6819173-6820172 Arabidopsis lyrata
AL3G28930 1.0kb downstream 1.0kb downstream 4056   true scaffold_3: 6820173-6824228 Arabidopsis lyrata
AL3G28930 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 6823229-6824228 Arabidopsis lyrata
AL3G28930 2.0kb upstream 2.0kb upstream 5056   true scaffold_3: 6818173-6823228 Arabidopsis lyrata
AL3G28930 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 6818173-6820172 Arabidopsis lyrata
AL3G28930 2.0kb downstream 2.0kb downstream 5056   true scaffold_3: 6820173-6825228 Arabidopsis lyrata
AL3G28930 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 6823229-6825228 Arabidopsis lyrata
AL3G28930 5.0kb upstream 5.0kb upstream 8056   true scaffold_3: 6815173-6823228 Arabidopsis lyrata
AL3G28930 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 6815173-6820172 Arabidopsis lyrata
AL3G28930 5.0kb downstream 5.0kb downstream 8056   true scaffold_3: 6820173-6828228 Arabidopsis lyrata
AL3G28930 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 6823229-6828228 Arabidopsis lyrata
AL3G28930 10.0kb upstream 10.0kb upstream 13056   true scaffold_3: 6810173-6823228 Arabidopsis lyrata
AL3G28930 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 6810173-6820172 Arabidopsis lyrata
AL3G28930 10.0kb downstream 10.0kb downstream 13056   true scaffold_3: 6820173-6833228 Arabidopsis lyrata
AL3G28930 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 6823229-6833228 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371039 5261 Brassicaceae View MSA
123831204 5264 Brassicales-Malvales View MSA
124339505 5266 SBM View MSA
124242700 5268 Malvidae View MSA
124050184 5270 Rosid View MSA
123743611 5271 Pentapetalae View MSA
122791989 5272 Eudicot View MSA
122049684 5273 Angiosperm View MSA
121346215 5274 Embryophyte View MSA
123426629 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain