Gene : Medtr2g101350 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR13360:SF1 - ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 1 Description:  AKAP7 2'5' RNA ligase-like domain protein
Genomic Order:  5545 Name:  ? Medtr2g101350
Secondary Identifier:  ? PAC:31067266
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g101350 0.5kb upstream 0.5kb upstream 7566 true chr2: 43568943-43576508 Medicago truncatula
Medtr2g101350 0.5kb upstream 0.5kb upstream 500 false chr2: 43568943-43569442 Medicago truncatula
Medtr2g101350 0.5kb downstream 0.5kb downstream 7566 true chr2: 43569443-43577008 Medicago truncatula
Medtr2g101350 0.5kb downstream 0.5kb downstream 500 false chr2: 43576509-43577008 Medicago truncatula
Medtr2g101350 1.0kb upstream 1.0kb upstream 8066 true chr2: 43568443-43576508 Medicago truncatula
Medtr2g101350 1.0kb upstream 1.0kb upstream 1000 false chr2: 43568443-43569442 Medicago truncatula
Medtr2g101350 1.0kb downstream 1.0kb downstream 8066 true chr2: 43569443-43577508 Medicago truncatula
Medtr2g101350 1.0kb downstream 1.0kb downstream 1000 false chr2: 43576509-43577508 Medicago truncatula
Medtr2g101350 2.0kb upstream 2.0kb upstream 9066 true chr2: 43567443-43576508 Medicago truncatula
Medtr2g101350 2.0kb upstream 2.0kb upstream 2000 false chr2: 43567443-43569442 Medicago truncatula
Medtr2g101350 2.0kb downstream 2.0kb downstream 9066 true chr2: 43569443-43578508 Medicago truncatula
Medtr2g101350 2.0kb downstream 2.0kb downstream 2000 false chr2: 43576509-43578508 Medicago truncatula
Medtr2g101350 5.0kb upstream 5.0kb upstream 12066 true chr2: 43564443-43576508 Medicago truncatula
Medtr2g101350 5.0kb upstream 5.0kb upstream 5000 false chr2: 43564443-43569442 Medicago truncatula
Medtr2g101350 5.0kb downstream 5.0kb downstream 12066 true chr2: 43569443-43581508 Medicago truncatula
Medtr2g101350 5.0kb downstream 5.0kb downstream 5000 false chr2: 43576509-43581508 Medicago truncatula
Medtr2g101350 10.0kb upstream 10.0kb upstream 17066 true chr2: 43559443-43576508 Medicago truncatula
Medtr2g101350 10.0kb upstream 10.0kb upstream 10000 false chr2: 43559443-43569442 Medicago truncatula
Medtr2g101350 10.0kb downstream 10.0kb downstream 17066 true chr2: 43569443-43586508 Medicago truncatula
Medtr2g101350 10.0kb downstream 10.0kb downstream 10000 false chr2: 43576509-43586508 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312274 5265 Fabidae View MSA
124050184 5270 Rosid View MSA
123743611 5271 Pentapetalae View MSA
122791989 5272 Eudicot View MSA
122049684 5273 Angiosperm View MSA
121346215 5274 Embryophyte View MSA
123426629 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.648        
cufflinks 1.139        
cufflinks 1.08        
cufflinks 0.302        
cufflinks 1.4       High
cufflinks 0.178       Low
cufflinks 0.464        
cufflinks 1.044        
cufflinks 0.381        

0 Strain