Gene : SRR12 C. reinhardtii v5.6
Primary Identifier:  ? Cre01.g045600 Defline:  (1 of 1) PTHR24363//PTHR24363:SF0 - SERINE/THREONINE PROTEIN KINASE // SUBFAMILY NOT NAMED
Genomic Order:  989 Name:  ? Cre01.g045600
Secondary Identifier:  ? PAC:30788940
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre01.g045600 0.5kb upstream 0.5kb upstream 8116 true chromosome_1: 6392567-6400682 Chlamydomonas reinhardtii
Cre01.g045600 0.5kb upstream 0.5kb upstream 500 false chromosome_1: 6400183-6400682 Chlamydomonas reinhardtii
Cre01.g045600 0.5kb downstream 0.5kb downstream 8116 true chromosome_1: 6392067-6400182 Chlamydomonas reinhardtii
Cre01.g045600 0.5kb downstream 0.5kb downstream 500 false chromosome_1: 6392067-6392566 Chlamydomonas reinhardtii
Cre01.g045600 1.0kb upstream 1.0kb upstream 8616 true chromosome_1: 6392567-6401182 Chlamydomonas reinhardtii
Cre01.g045600 1.0kb upstream 1.0kb upstream 1000 false chromosome_1: 6400183-6401182 Chlamydomonas reinhardtii
Cre01.g045600 1.0kb downstream 1.0kb downstream 8616 true chromosome_1: 6391567-6400182 Chlamydomonas reinhardtii
Cre01.g045600 1.0kb downstream 1.0kb downstream 1000 false chromosome_1: 6391567-6392566 Chlamydomonas reinhardtii
Cre01.g045600 2.0kb upstream 2.0kb upstream 9616 true chromosome_1: 6392567-6402182 Chlamydomonas reinhardtii
Cre01.g045600 2.0kb upstream 2.0kb upstream 2000 false chromosome_1: 6400183-6402182 Chlamydomonas reinhardtii
Cre01.g045600 2.0kb downstream 2.0kb downstream 9616 true chromosome_1: 6390567-6400182 Chlamydomonas reinhardtii
Cre01.g045600 2.0kb downstream 2.0kb downstream 2000 false chromosome_1: 6390567-6392566 Chlamydomonas reinhardtii
Cre01.g045600 5.0kb upstream 5.0kb upstream 12616 true chromosome_1: 6392567-6405182 Chlamydomonas reinhardtii
Cre01.g045600 5.0kb upstream 5.0kb upstream 5000 false chromosome_1: 6400183-6405182 Chlamydomonas reinhardtii
Cre01.g045600 5.0kb downstream 5.0kb downstream 12616 true chromosome_1: 6387567-6400182 Chlamydomonas reinhardtii
Cre01.g045600 5.0kb downstream 5.0kb downstream 5000 false chromosome_1: 6387567-6392566 Chlamydomonas reinhardtii
Cre01.g045600 10.0kb upstream 10.0kb upstream 17616 true chromosome_1: 6392567-6410182 Chlamydomonas reinhardtii
Cre01.g045600 10.0kb upstream 10.0kb upstream 10000 false chromosome_1: 6400183-6410182 Chlamydomonas reinhardtii
Cre01.g045600 10.0kb downstream 10.0kb downstream 17616 true chromosome_1: 6382567-6400182 Chlamydomonas reinhardtii
Cre01.g045600 10.0kb downstream 10.0kb downstream 10000 false chromosome_1: 6382567-6392566 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124111334 5260 Chlorophyte View MSA
123429169 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.054        
cufflinks 2.531        
cufflinks 2.329        
cufflinks 2.363        
cufflinks 2.58        
cufflinks 2.483        
cufflinks 1.69        
cufflinks 2.973        
cufflinks 3.046        
cufflinks 1.029       Low
cufflinks 1.916        
cufflinks 2.85        
cufflinks 2.294        
cufflinks 2.4        
cufflinks 2.158        
cufflinks 2.829        
cufflinks 4.132       High
cufflinks 2.843        
cufflinks 0.249       Low
cufflinks 1.567        
cufflinks 2.726        
cufflinks 3.293        
cufflinks 1.043       Low
cufflinks 2.723        
cufflinks 4.271       High
cufflinks 3.30563 0.430534 6.18072    
cufflinks 14.094 3.83868 24.3494    
cufflinks 6.78419 0.0 13.9182    
cufflinks 4.11005 0.627133 7.59296    
cufflinks 4.30015 0.594264 8.00604    

0 Strain