Gene : HLA8 C. reinhardtii v5.6
Primary Identifier:  ? Cre01.g048150 Defline:  (1 of 2) 3.1.31.1 - Micrococcal nuclease / Micrococcal endonuclease
Genomic Order:  1037 Name:  ? Cre01.g048150
Secondary Identifier:  ? PAC:30788391
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre01.g048150 0.5kb upstream 0.5kb upstream 3000 true chromosome_1: 6703886-6706885 Chlamydomonas reinhardtii
Cre01.g048150 0.5kb upstream 0.5kb upstream 500 false chromosome_1: 6706386-6706885 Chlamydomonas reinhardtii
Cre01.g048150 0.5kb downstream 0.5kb downstream 3000 true chromosome_1: 6703386-6706385 Chlamydomonas reinhardtii
Cre01.g048150 0.5kb downstream 0.5kb downstream 500 false chromosome_1: 6703386-6703885 Chlamydomonas reinhardtii
Cre01.g048150 1.0kb upstream 1.0kb upstream 3500 true chromosome_1: 6703886-6707385 Chlamydomonas reinhardtii
Cre01.g048150 1.0kb upstream 1.0kb upstream 1000 false chromosome_1: 6706386-6707385 Chlamydomonas reinhardtii
Cre01.g048150 1.0kb downstream 1.0kb downstream 3500 true chromosome_1: 6702886-6706385 Chlamydomonas reinhardtii
Cre01.g048150 1.0kb downstream 1.0kb downstream 1000 false chromosome_1: 6702886-6703885 Chlamydomonas reinhardtii
Cre01.g048150 2.0kb upstream 2.0kb upstream 4500 true chromosome_1: 6703886-6708385 Chlamydomonas reinhardtii
Cre01.g048150 2.0kb upstream 2.0kb upstream 2000 false chromosome_1: 6706386-6708385 Chlamydomonas reinhardtii
Cre01.g048150 2.0kb downstream 2.0kb downstream 4500 true chromosome_1: 6701886-6706385 Chlamydomonas reinhardtii
Cre01.g048150 2.0kb downstream 2.0kb downstream 2000 false chromosome_1: 6701886-6703885 Chlamydomonas reinhardtii
Cre01.g048150 5.0kb upstream 5.0kb upstream 7500 true chromosome_1: 6703886-6711385 Chlamydomonas reinhardtii
Cre01.g048150 5.0kb upstream 5.0kb upstream 5000 false chromosome_1: 6706386-6711385 Chlamydomonas reinhardtii
Cre01.g048150 5.0kb downstream 5.0kb downstream 7500 true chromosome_1: 6698886-6706385 Chlamydomonas reinhardtii
Cre01.g048150 5.0kb downstream 5.0kb downstream 5000 false chromosome_1: 6698886-6703885 Chlamydomonas reinhardtii
Cre01.g048150 10.0kb upstream 10.0kb upstream 12500 true chromosome_1: 6703886-6716385 Chlamydomonas reinhardtii
Cre01.g048150 10.0kb upstream 10.0kb upstream 10000 false chromosome_1: 6706386-6716385 Chlamydomonas reinhardtii
Cre01.g048150 10.0kb downstream 10.0kb downstream 12500 true chromosome_1: 6693886-6706385 Chlamydomonas reinhardtii
Cre01.g048150 10.0kb downstream 10.0kb downstream 10000 false chromosome_1: 6693886-6703885 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124098139 5260 Chlorophyte View MSA
123428455 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.441     High  
cufflinks 10.909        
cufflinks 36.477     High  
cufflinks 12.164        
cufflinks 12.171        
cufflinks 33.73     High  
cufflinks 2.548       Low
cufflinks 11.297        
cufflinks 14.468     High  
cufflinks 29.458     High  
cufflinks 13.907        
cufflinks 23.494     High  
cufflinks 72.463     High High
cufflinks 78.553     High High
cufflinks 6.804       Low
cufflinks 44.285     High High
cufflinks 27.759     High  
cufflinks 25.895     High  
cufflinks 2.55       Low
cufflinks 23.83     High  
cufflinks 8.745        
cufflinks 12.028     High  
cufflinks 26.189     High  
cufflinks 19.334     High  
cufflinks 13.524     High  
cufflinks 103.488 0.0 210.586 High Low
cufflinks 38.8901 10.3552 67.425 High  
cufflinks 7.88051 0.0 16.5036    
cufflinks 39.3043 1.98459 76.6241 High Low
cufflinks 149.432 7.49856 291.366 High High

0 Strain