Gene : Cre01.g052550 C. reinhardtii v5.6
Defline:  (1 of 39) PTHR12298 - PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED Genomic Order:  1130
Name:  ? Cre01.g052550 Secondary Identifier:  ? PAC:30788909
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre01.g052550 0.5kb upstream 0.5kb upstream 7066 true chromosome_1: 7275481-7282546 Chlamydomonas reinhardtii
Cre01.g052550 0.5kb upstream 0.5kb upstream 500 false chromosome_1: 7275481-7275980 Chlamydomonas reinhardtii
Cre01.g052550 0.5kb downstream 0.5kb downstream 7066 true chromosome_1: 7275981-7283046 Chlamydomonas reinhardtii
Cre01.g052550 0.5kb downstream 0.5kb downstream 500 false chromosome_1: 7282547-7283046 Chlamydomonas reinhardtii
Cre01.g052550 1.0kb upstream 1.0kb upstream 7566 true chromosome_1: 7274981-7282546 Chlamydomonas reinhardtii
Cre01.g052550 1.0kb upstream 1.0kb upstream 1000 false chromosome_1: 7274981-7275980 Chlamydomonas reinhardtii
Cre01.g052550 1.0kb downstream 1.0kb downstream 7566 true chromosome_1: 7275981-7283546 Chlamydomonas reinhardtii
Cre01.g052550 1.0kb downstream 1.0kb downstream 1000 false chromosome_1: 7282547-7283546 Chlamydomonas reinhardtii
Cre01.g052550 2.0kb upstream 2.0kb upstream 8566 true chromosome_1: 7273981-7282546 Chlamydomonas reinhardtii
Cre01.g052550 2.0kb upstream 2.0kb upstream 2000 false chromosome_1: 7273981-7275980 Chlamydomonas reinhardtii
Cre01.g052550 2.0kb downstream 2.0kb downstream 8566 true chromosome_1: 7275981-7284546 Chlamydomonas reinhardtii
Cre01.g052550 2.0kb downstream 2.0kb downstream 2000 false chromosome_1: 7282547-7284546 Chlamydomonas reinhardtii
Cre01.g052550 5.0kb upstream 5.0kb upstream 11566 true chromosome_1: 7270981-7282546 Chlamydomonas reinhardtii
Cre01.g052550 5.0kb upstream 5.0kb upstream 5000 false chromosome_1: 7270981-7275980 Chlamydomonas reinhardtii
Cre01.g052550 5.0kb downstream 5.0kb downstream 11566 true chromosome_1: 7275981-7287546 Chlamydomonas reinhardtii
Cre01.g052550 5.0kb downstream 5.0kb downstream 5000 false chromosome_1: 7282547-7287546 Chlamydomonas reinhardtii
Cre01.g052550 10.0kb upstream 10.0kb upstream 16566 true chromosome_1: 7265981-7282546 Chlamydomonas reinhardtii
Cre01.g052550 10.0kb upstream 10.0kb upstream 10000 false chromosome_1: 7265981-7275980 Chlamydomonas reinhardtii
Cre01.g052550 10.0kb downstream 10.0kb downstream 16566 true chromosome_1: 7275981-7292546 Chlamydomonas reinhardtii
Cre01.g052550 10.0kb downstream 10.0kb downstream 10000 false chromosome_1: 7282547-7292546 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124081842 5260 Chlorophyte View MSA
123399548 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.505       Low
cufflinks 2.957        
cufflinks 2.774        
cufflinks 3.956        
cufflinks 2.69        
cufflinks 2.516        
cufflinks 3.389        
cufflinks 4.334       High
cufflinks 1.988        
cufflinks 1.464       Low
cufflinks 3.087        
cufflinks 3.842        
cufflinks 1.27       Low
cufflinks 2.495        
cufflinks 2.68        
cufflinks 2.583        
cufflinks 3.587        
cufflinks 3.863        
cufflinks 0.823       Low
cufflinks 3.58        
cufflinks 3.277        
cufflinks 2.566        
cufflinks 3.105        
cufflinks 3.752        
cufflinks 3.119        
cufflinks 8.83728 0.582659 17.0919    
cufflinks 4.28868 1.15093 7.42643    
cufflinks 3.27869 0.0 6.6485   Low
cufflinks 4.79456 0.586475 9.00264    
cufflinks 3.44557 0.677498 6.21364   Low

0 Strain