Gene : Cre01.g028450 C. reinhardtii v5.6
Defline:  (1 of 1) PTHR30544//PTHR30544:SF2 - 23S RRNA METHYLTRANSFERASE // SUBFAMILY NOT NAMED Genomic Order:  625
Name:  ? Cre01.g028450 Secondary Identifier:  ? PAC:30788447
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre01.g028450 0.5kb upstream 0.5kb upstream 5843 true chromosome_1: 4247910-4253752 Chlamydomonas reinhardtii
Cre01.g028450 0.5kb upstream 0.5kb upstream 500 false chromosome_1: 4253253-4253752 Chlamydomonas reinhardtii
Cre01.g028450 0.5kb downstream 0.5kb downstream 5843 true chromosome_1: 4247410-4253252 Chlamydomonas reinhardtii
Cre01.g028450 0.5kb downstream 0.5kb downstream 500 false chromosome_1: 4247410-4247909 Chlamydomonas reinhardtii
Cre01.g028450 1.0kb upstream 1.0kb upstream 6343 true chromosome_1: 4247910-4254252 Chlamydomonas reinhardtii
Cre01.g028450 1.0kb upstream 1.0kb upstream 1000 false chromosome_1: 4253253-4254252 Chlamydomonas reinhardtii
Cre01.g028450 1.0kb downstream 1.0kb downstream 6343 true chromosome_1: 4246910-4253252 Chlamydomonas reinhardtii
Cre01.g028450 1.0kb downstream 1.0kb downstream 1000 false chromosome_1: 4246910-4247909 Chlamydomonas reinhardtii
Cre01.g028450 2.0kb upstream 2.0kb upstream 7343 true chromosome_1: 4247910-4255252 Chlamydomonas reinhardtii
Cre01.g028450 2.0kb upstream 2.0kb upstream 2000 false chromosome_1: 4253253-4255252 Chlamydomonas reinhardtii
Cre01.g028450 2.0kb downstream 2.0kb downstream 7343 true chromosome_1: 4245910-4253252 Chlamydomonas reinhardtii
Cre01.g028450 2.0kb downstream 2.0kb downstream 2000 false chromosome_1: 4245910-4247909 Chlamydomonas reinhardtii
Cre01.g028450 5.0kb upstream 5.0kb upstream 10343 true chromosome_1: 4247910-4258252 Chlamydomonas reinhardtii
Cre01.g028450 5.0kb upstream 5.0kb upstream 5000 false chromosome_1: 4253253-4258252 Chlamydomonas reinhardtii
Cre01.g028450 5.0kb downstream 5.0kb downstream 10343 true chromosome_1: 4242910-4253252 Chlamydomonas reinhardtii
Cre01.g028450 5.0kb downstream 5.0kb downstream 5000 false chromosome_1: 4242910-4247909 Chlamydomonas reinhardtii
Cre01.g028450 10.0kb upstream 10.0kb upstream 15343 true chromosome_1: 4247910-4263252 Chlamydomonas reinhardtii
Cre01.g028450 10.0kb upstream 10.0kb upstream 10000 false chromosome_1: 4253253-4263252 Chlamydomonas reinhardtii
Cre01.g028450 10.0kb downstream 10.0kb downstream 15343 true chromosome_1: 4237910-4253252 Chlamydomonas reinhardtii
Cre01.g028450 10.0kb downstream 10.0kb downstream 10000 false chromosome_1: 4237910-4247909 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124112602 5260 Chlorophyte View MSA
123429187 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.731        
cufflinks 3.52        
cufflinks 1.803        
cufflinks 2.359        
cufflinks 2.872        
cufflinks 3.296        
cufflinks 4.207       High
cufflinks 2.956        
cufflinks 1.205        
cufflinks 0.752       Low
cufflinks 2.441        
cufflinks 3.432        
cufflinks 1.47        
cufflinks 2.982        
cufflinks 2.438        
cufflinks 2.854        
cufflinks 0.463       Low
cufflinks 2.047        
cufflinks 1.218        
cufflinks 4.301       High
cufflinks 3.066        
cufflinks 1.038       Low
cufflinks 3.171        
cufflinks 2.986        
cufflinks 0.648       Low
cufflinks 30.9984 0.917815 61.0791 High High
cufflinks 11.4243 3.07825 19.7703   High
cufflinks 1.44737 0.0 3.47306   Low
cufflinks 4.81688 0.790798 8.84296   Low
cufflinks 12.3452 2.42143 22.2689   High

0 Strain