Gene : DEG8 C. reinhardtii v5.6
Primary Identifier:  ? Cre01.g028350 Defline:  (1 of 2) PTHR22939//PTHR22939:SF99 - SERINE PROTEASE FAMILY S1C HTRA-RELATED // PROTEASE DO-LIKE 8, CHLOROPLASTIC
Genomic Order:  622 Name:  ? Cre01.g028350
Secondary Identifier:  ? PAC:30789587
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre01.g028350 0.5kb upstream 0.5kb upstream 5718 true chromosome_1: 4231164-4236881 Chlamydomonas reinhardtii
Cre01.g028350 0.5kb upstream 0.5kb upstream 500 false chromosome_1: 4231164-4231663 Chlamydomonas reinhardtii
Cre01.g028350 0.5kb downstream 0.5kb downstream 5718 true chromosome_1: 4231664-4237381 Chlamydomonas reinhardtii
Cre01.g028350 0.5kb downstream 0.5kb downstream 500 false chromosome_1: 4236882-4237381 Chlamydomonas reinhardtii
Cre01.g028350 1.0kb upstream 1.0kb upstream 6218 true chromosome_1: 4230664-4236881 Chlamydomonas reinhardtii
Cre01.g028350 1.0kb upstream 1.0kb upstream 1000 false chromosome_1: 4230664-4231663 Chlamydomonas reinhardtii
Cre01.g028350 1.0kb downstream 1.0kb downstream 6218 true chromosome_1: 4231664-4237881 Chlamydomonas reinhardtii
Cre01.g028350 1.0kb downstream 1.0kb downstream 1000 false chromosome_1: 4236882-4237881 Chlamydomonas reinhardtii
Cre01.g028350 2.0kb upstream 2.0kb upstream 7218 true chromosome_1: 4229664-4236881 Chlamydomonas reinhardtii
Cre01.g028350 2.0kb upstream 2.0kb upstream 2000 false chromosome_1: 4229664-4231663 Chlamydomonas reinhardtii
Cre01.g028350 2.0kb downstream 2.0kb downstream 7218 true chromosome_1: 4231664-4238881 Chlamydomonas reinhardtii
Cre01.g028350 2.0kb downstream 2.0kb downstream 2000 false chromosome_1: 4236882-4238881 Chlamydomonas reinhardtii
Cre01.g028350 5.0kb upstream 5.0kb upstream 10218 true chromosome_1: 4226664-4236881 Chlamydomonas reinhardtii
Cre01.g028350 5.0kb upstream 5.0kb upstream 5000 false chromosome_1: 4226664-4231663 Chlamydomonas reinhardtii
Cre01.g028350 5.0kb downstream 5.0kb downstream 10218 true chromosome_1: 4231664-4241881 Chlamydomonas reinhardtii
Cre01.g028350 5.0kb downstream 5.0kb downstream 5000 false chromosome_1: 4236882-4241881 Chlamydomonas reinhardtii
Cre01.g028350 10.0kb upstream 10.0kb upstream 15218 true chromosome_1: 4221664-4236881 Chlamydomonas reinhardtii
Cre01.g028350 10.0kb upstream 10.0kb upstream 10000 false chromosome_1: 4221664-4231663 Chlamydomonas reinhardtii
Cre01.g028350 10.0kb downstream 10.0kb downstream 15218 true chromosome_1: 4231664-4246881 Chlamydomonas reinhardtii
Cre01.g028350 10.0kb downstream 10.0kb downstream 10000 false chromosome_1: 4236882-4246881 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124110254 5260 Chlorophyte View MSA
123424276 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.155        
cufflinks 1.545        
cufflinks 1.7        
cufflinks 1.761        
cufflinks 1.529        
cufflinks 1.696        
cufflinks 1.159        
cufflinks 2.256        
cufflinks 1.978        
cufflinks 0.74       Low
cufflinks 1.748        
cufflinks 1.837        
cufflinks 1.953        
cufflinks 1.568        
cufflinks 1.737        
cufflinks 2.792        
cufflinks 2.852       High
cufflinks 1.528        
cufflinks 0.238       Low
cufflinks 1.121        
cufflinks 1.84        
cufflinks 3.061       High
cufflinks 1.086        
cufflinks 2.745        
cufflinks 2.982       High
cufflinks 1.3068 0.0 2.65494    
cufflinks 3.54851 0.0964717 7.00056   Low
cufflinks 3.18215 0.0 7.22228    
cufflinks 2.06883 0.0827486 4.05491   High
cufflinks 8.47821 1.57237 15.384   High

0 Strain