Gene : VPS34 C. reinhardtii v5.6
Primary Identifier:  ? Cre01.g035500 Defline:  (1 of 1) 2.7.1.137 - Phosphatidylinositol 3-kinase / Type III phosphoinositide 3-kinase
Genomic Order:  773 Name:  ? Cre01.g035500
Secondary Identifier:  ? PAC:30788401
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii PWY-6352 Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre01.g035500 0.5kb upstream 0.5kb upstream 12232 true chromosome_1: 5100186-5112417 Chlamydomonas reinhardtii
Cre01.g035500 0.5kb upstream 0.5kb upstream 500 false chromosome_1: 5100186-5100685 Chlamydomonas reinhardtii
Cre01.g035500 0.5kb downstream 0.5kb downstream 12232 true chromosome_1: 5100686-5112917 Chlamydomonas reinhardtii
Cre01.g035500 0.5kb downstream 0.5kb downstream 500 false chromosome_1: 5112418-5112917 Chlamydomonas reinhardtii
Cre01.g035500 1.0kb upstream 1.0kb upstream 12732 true chromosome_1: 5099686-5112417 Chlamydomonas reinhardtii
Cre01.g035500 1.0kb upstream 1.0kb upstream 1000 false chromosome_1: 5099686-5100685 Chlamydomonas reinhardtii
Cre01.g035500 1.0kb downstream 1.0kb downstream 12732 true chromosome_1: 5100686-5113417 Chlamydomonas reinhardtii
Cre01.g035500 1.0kb downstream 1.0kb downstream 1000 false chromosome_1: 5112418-5113417 Chlamydomonas reinhardtii
Cre01.g035500 2.0kb upstream 2.0kb upstream 13732 true chromosome_1: 5098686-5112417 Chlamydomonas reinhardtii
Cre01.g035500 2.0kb upstream 2.0kb upstream 2000 false chromosome_1: 5098686-5100685 Chlamydomonas reinhardtii
Cre01.g035500 2.0kb downstream 2.0kb downstream 13732 true chromosome_1: 5100686-5114417 Chlamydomonas reinhardtii
Cre01.g035500 2.0kb downstream 2.0kb downstream 2000 false chromosome_1: 5112418-5114417 Chlamydomonas reinhardtii
Cre01.g035500 5.0kb upstream 5.0kb upstream 16732 true chromosome_1: 5095686-5112417 Chlamydomonas reinhardtii
Cre01.g035500 5.0kb upstream 5.0kb upstream 5000 false chromosome_1: 5095686-5100685 Chlamydomonas reinhardtii
Cre01.g035500 5.0kb downstream 5.0kb downstream 16732 true chromosome_1: 5100686-5117417 Chlamydomonas reinhardtii
Cre01.g035500 5.0kb downstream 5.0kb downstream 5000 false chromosome_1: 5112418-5117417 Chlamydomonas reinhardtii
Cre01.g035500 10.0kb upstream 10.0kb upstream 21732 true chromosome_1: 5090686-5112417 Chlamydomonas reinhardtii
Cre01.g035500 10.0kb upstream 10.0kb upstream 10000 false chromosome_1: 5090686-5100685 Chlamydomonas reinhardtii
Cre01.g035500 10.0kb downstream 10.0kb downstream 21732 true chromosome_1: 5100686-5122417 Chlamydomonas reinhardtii
Cre01.g035500 10.0kb downstream 10.0kb downstream 10000 false chromosome_1: 5112418-5122417 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124111867 5260 Chlorophyte View MSA
123428471 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.385        
cufflinks 0.73        
cufflinks 0.637        
cufflinks 1.014        
cufflinks 0.583        
cufflinks 0.552        
cufflinks 0.729        
cufflinks 1.028        
cufflinks 0.476        
cufflinks 0.15       Low
cufflinks 0.941        
cufflinks 0.871        
cufflinks 0.292       Low
cufflinks 0.635        
cufflinks 0.794        
cufflinks 0.546        
cufflinks 1.296       High
cufflinks 0.724        
cufflinks 0.145       Low
cufflinks 0.921        
cufflinks 0.712        
cufflinks 1.212       High
cufflinks 0.626        
cufflinks 1.042        
cufflinks 1.556       High
cufflinks 2.58806 0.434546 4.74158    
cufflinks 4.12352 1.05667 7.19037    
cufflinks 2.85786 0.0 5.90185    
cufflinks 2.4852 0.413872 4.55653    
cufflinks 1.93927 0.284411 3.59412    

0 Strain