Gene : Cre01.g038100 C. reinhardtii v5.6
Defline:  (1 of 10) PF01062 - Bestrophin, RFP-TM, chloride channel (Bestrophin) Genomic Order:  826
Name:  ? Cre01.g038100 Secondary Identifier:  ? PAC:30789074
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre01.g038100 0.5kb upstream 0.5kb upstream 7147 true chromosome_1: 5421856-5429002 Chlamydomonas reinhardtii
Cre01.g038100 0.5kb upstream 0.5kb upstream 500 false chromosome_1: 5421856-5422355 Chlamydomonas reinhardtii
Cre01.g038100 0.5kb downstream 0.5kb downstream 7147 true chromosome_1: 5422356-5429502 Chlamydomonas reinhardtii
Cre01.g038100 0.5kb downstream 0.5kb downstream 500 false chromosome_1: 5429003-5429502 Chlamydomonas reinhardtii
Cre01.g038100 1.0kb upstream 1.0kb upstream 7647 true chromosome_1: 5421356-5429002 Chlamydomonas reinhardtii
Cre01.g038100 1.0kb upstream 1.0kb upstream 1000 false chromosome_1: 5421356-5422355 Chlamydomonas reinhardtii
Cre01.g038100 1.0kb downstream 1.0kb downstream 7647 true chromosome_1: 5422356-5430002 Chlamydomonas reinhardtii
Cre01.g038100 1.0kb downstream 1.0kb downstream 1000 false chromosome_1: 5429003-5430002 Chlamydomonas reinhardtii
Cre01.g038100 2.0kb upstream 2.0kb upstream 8647 true chromosome_1: 5420356-5429002 Chlamydomonas reinhardtii
Cre01.g038100 2.0kb upstream 2.0kb upstream 2000 false chromosome_1: 5420356-5422355 Chlamydomonas reinhardtii
Cre01.g038100 2.0kb downstream 2.0kb downstream 8647 true chromosome_1: 5422356-5431002 Chlamydomonas reinhardtii
Cre01.g038100 2.0kb downstream 2.0kb downstream 2000 false chromosome_1: 5429003-5431002 Chlamydomonas reinhardtii
Cre01.g038100 5.0kb upstream 5.0kb upstream 11647 true chromosome_1: 5417356-5429002 Chlamydomonas reinhardtii
Cre01.g038100 5.0kb upstream 5.0kb upstream 5000 false chromosome_1: 5417356-5422355 Chlamydomonas reinhardtii
Cre01.g038100 5.0kb downstream 5.0kb downstream 11647 true chromosome_1: 5422356-5434002 Chlamydomonas reinhardtii
Cre01.g038100 5.0kb downstream 5.0kb downstream 5000 false chromosome_1: 5429003-5434002 Chlamydomonas reinhardtii
Cre01.g038100 10.0kb upstream 10.0kb upstream 16647 true chromosome_1: 5412356-5429002 Chlamydomonas reinhardtii
Cre01.g038100 10.0kb upstream 10.0kb upstream 10000 false chromosome_1: 5412356-5422355 Chlamydomonas reinhardtii
Cre01.g038100 10.0kb downstream 10.0kb downstream 16647 true chromosome_1: 5422356-5439002 Chlamydomonas reinhardtii
Cre01.g038100 10.0kb downstream 10.0kb downstream 10000 false chromosome_1: 5429003-5439002 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124113433 5260 Chlorophyte View MSA
123427884 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.15       Low
cufflinks 3.954        
cufflinks 13.01        
cufflinks 17.539     High  
cufflinks 5.138        
cufflinks 10.625        
cufflinks 5.686        
cufflinks 33.982     High High
cufflinks 2.889       Low
cufflinks 9.654     High  
cufflinks 18.93     High  
cufflinks 13.596        
cufflinks 24.494     High High
cufflinks 11.548        
cufflinks 5.144        
cufflinks 7.723        
cufflinks 7.361        
cufflinks 15.495     High  
cufflinks 2.218       Low
cufflinks 21.757     High High
cufflinks 6.912        
cufflinks 3.203       Low
cufflinks 16.502     High  
cufflinks 51.569     High High
cufflinks 4.34        
cufflinks 63.8611 0.0 130.748 High High
cufflinks 11.9378 3.25438 20.6212    
cufflinks 14.1017 0.0 28.4129   Low
cufflinks 14.7473 1.02227 28.4724   Low
cufflinks 29.8195 3.70091 55.9381 High High

0 Strain