Gene : Cre10.g433650 C. reinhardtii v5.6
Defline:  (1 of 4) 2.1.1.178 - 16S rRNA (cytosine(1407)-C(5))-methyltransferase Genomic Order:  356
Name:  ? Cre10.g433650 Secondary Identifier:  ? PAC:30789733
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre10.g433650 0.5kb upstream 0.5kb upstream 4202 true chromosome_10: 2165486-2169687 Chlamydomonas reinhardtii
Cre10.g433650 0.5kb upstream 0.5kb upstream 500 false chromosome_10: 2165486-2165985 Chlamydomonas reinhardtii
Cre10.g433650 0.5kb downstream 0.5kb downstream 4202 true chromosome_10: 2165986-2170187 Chlamydomonas reinhardtii
Cre10.g433650 0.5kb downstream 0.5kb downstream 500 false chromosome_10: 2169688-2170187 Chlamydomonas reinhardtii
Cre10.g433650 1.0kb upstream 1.0kb upstream 4702 true chromosome_10: 2164986-2169687 Chlamydomonas reinhardtii
Cre10.g433650 1.0kb upstream 1.0kb upstream 1000 false chromosome_10: 2164986-2165985 Chlamydomonas reinhardtii
Cre10.g433650 1.0kb downstream 1.0kb downstream 4702 true chromosome_10: 2165986-2170687 Chlamydomonas reinhardtii
Cre10.g433650 1.0kb downstream 1.0kb downstream 1000 false chromosome_10: 2169688-2170687 Chlamydomonas reinhardtii
Cre10.g433650 2.0kb upstream 2.0kb upstream 5702 true chromosome_10: 2163986-2169687 Chlamydomonas reinhardtii
Cre10.g433650 2.0kb upstream 2.0kb upstream 2000 false chromosome_10: 2163986-2165985 Chlamydomonas reinhardtii
Cre10.g433650 2.0kb downstream 2.0kb downstream 5702 true chromosome_10: 2165986-2171687 Chlamydomonas reinhardtii
Cre10.g433650 2.0kb downstream 2.0kb downstream 2000 false chromosome_10: 2169688-2171687 Chlamydomonas reinhardtii
Cre10.g433650 5.0kb upstream 5.0kb upstream 8702 true chromosome_10: 2160986-2169687 Chlamydomonas reinhardtii
Cre10.g433650 5.0kb upstream 5.0kb upstream 5000 false chromosome_10: 2160986-2165985 Chlamydomonas reinhardtii
Cre10.g433650 5.0kb downstream 5.0kb downstream 8702 true chromosome_10: 2165986-2174687 Chlamydomonas reinhardtii
Cre10.g433650 5.0kb downstream 5.0kb downstream 5000 false chromosome_10: 2169688-2174687 Chlamydomonas reinhardtii
Cre10.g433650 10.0kb upstream 10.0kb upstream 13702 true chromosome_10: 2155986-2169687 Chlamydomonas reinhardtii
Cre10.g433650 10.0kb upstream 10.0kb upstream 10000 false chromosome_10: 2155986-2165985 Chlamydomonas reinhardtii
Cre10.g433650 10.0kb downstream 10.0kb downstream 13702 true chromosome_10: 2165986-2179687 Chlamydomonas reinhardtii
Cre10.g433650 10.0kb downstream 10.0kb downstream 10000 false chromosome_10: 2169688-2179687 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124076997 5260 Chlorophyte View MSA
123427467 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.072        
cufflinks 1.173        
cufflinks 0.804        
cufflinks 0.738        
cufflinks 0.639        
cufflinks 0.708        
cufflinks 0.774        
cufflinks 0.78        
cufflinks 1.461       High
cufflinks 0.099       Low
cufflinks 0.559        
cufflinks 0.573        
cufflinks 0.692        
cufflinks 0.666        
cufflinks 0.634        
cufflinks 1.054        
cufflinks 0.252        
cufflinks 0.778        
cufflinks 0.012     Low Low
cufflinks 0.122     Low Low
cufflinks 0.652        
cufflinks 0.49        
cufflinks 0.179     Low  
cufflinks 1.274        
cufflinks 0.269        
cufflinks 11.7785 1.45498 22.1021   High
cufflinks 3.80375 0.309681 7.29783   High
cufflinks 1.07333 0.0 2.77647    
cufflinks 1.50821 0.04805 2.96837    
cufflinks 2.49815 0.136716 4.85958   High

0 Strain