Gene : TOP1A C. reinhardtii v5.6
Primary Identifier:  ? Cre10.g442850 Defline:  (1 of 1) K03168 - DNA topoisomerase I [EC:5.99.1.2] (topA)
Genomic Order:  543 Name:  ? Cre10.g442850
Secondary Identifier:  ? PAC:30790624
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre10.g442850 0.5kb upstream 0.5kb upstream 9181 true chromosome_10: 3224988-3234168 Chlamydomonas reinhardtii
Cre10.g442850 0.5kb upstream 0.5kb upstream 500 false chromosome_10: 3233669-3234168 Chlamydomonas reinhardtii
Cre10.g442850 0.5kb downstream 0.5kb downstream 9181 true chromosome_10: 3224488-3233668 Chlamydomonas reinhardtii
Cre10.g442850 0.5kb downstream 0.5kb downstream 500 false chromosome_10: 3224488-3224987 Chlamydomonas reinhardtii
Cre10.g442850 1.0kb upstream 1.0kb upstream 9681 true chromosome_10: 3224988-3234668 Chlamydomonas reinhardtii
Cre10.g442850 1.0kb upstream 1.0kb upstream 1000 false chromosome_10: 3233669-3234668 Chlamydomonas reinhardtii
Cre10.g442850 1.0kb downstream 1.0kb downstream 9681 true chromosome_10: 3223988-3233668 Chlamydomonas reinhardtii
Cre10.g442850 1.0kb downstream 1.0kb downstream 1000 false chromosome_10: 3223988-3224987 Chlamydomonas reinhardtii
Cre10.g442850 2.0kb upstream 2.0kb upstream 10681 true chromosome_10: 3224988-3235668 Chlamydomonas reinhardtii
Cre10.g442850 2.0kb upstream 2.0kb upstream 2000 false chromosome_10: 3233669-3235668 Chlamydomonas reinhardtii
Cre10.g442850 2.0kb downstream 2.0kb downstream 10681 true chromosome_10: 3222988-3233668 Chlamydomonas reinhardtii
Cre10.g442850 2.0kb downstream 2.0kb downstream 2000 false chromosome_10: 3222988-3224987 Chlamydomonas reinhardtii
Cre10.g442850 5.0kb upstream 5.0kb upstream 13681 true chromosome_10: 3224988-3238668 Chlamydomonas reinhardtii
Cre10.g442850 5.0kb upstream 5.0kb upstream 5000 false chromosome_10: 3233669-3238668 Chlamydomonas reinhardtii
Cre10.g442850 5.0kb downstream 5.0kb downstream 13681 true chromosome_10: 3219988-3233668 Chlamydomonas reinhardtii
Cre10.g442850 5.0kb downstream 5.0kb downstream 5000 false chromosome_10: 3219988-3224987 Chlamydomonas reinhardtii
Cre10.g442850 10.0kb upstream 10.0kb upstream 18681 true chromosome_10: 3224988-3243668 Chlamydomonas reinhardtii
Cre10.g442850 10.0kb upstream 10.0kb upstream 10000 false chromosome_10: 3233669-3243668 Chlamydomonas reinhardtii
Cre10.g442850 10.0kb downstream 10.0kb downstream 18681 true chromosome_10: 3214988-3233668 Chlamydomonas reinhardtii
Cre10.g442850 10.0kb downstream 10.0kb downstream 10000 false chromosome_10: 3214988-3224987 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124112299 5260 Chlorophyte View MSA
123426817 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.517        
cufflinks 1.116       High
cufflinks 0.718        
cufflinks 0.838        
cufflinks 0.71        
cufflinks 0.643        
cufflinks 0.922        
cufflinks 1.028        
cufflinks 0.73        
cufflinks 0.201       Low
cufflinks 0.974        
cufflinks 0.872        
cufflinks 0.434       Low
cufflinks 0.855        
cufflinks 0.745        
cufflinks 0.813        
cufflinks 0.474        
cufflinks 0.696        
cufflinks 0.304       Low
cufflinks 1.22       High
cufflinks 0.755        
cufflinks 0.538        
cufflinks 0.869        
cufflinks 1.045        
cufflinks 0.479        
cufflinks 7.07552 0.831183 13.3199   Low
cufflinks 8.10258 2.18322 14.0219    
cufflinks 1.3727 0.0 3.14542   Low
cufflinks 3.86846 0.648421 7.0885   Low
cufflinks 5.73449 1.15205 10.3169    

0 Strain